RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PBX4Q9BYU1 374 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 TMEM39AQ9NV64 488 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 SLC5A4Q9NY91 659 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 TRANK1O15050 2925 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 GPR37L1O60883 481 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 IGHA2P01877 340 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 RHBDL3P58872 404 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 ATP2B3Q16720 1220 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 EPHX3Q9H6B9 360 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 CEP126Q9P2H0 1117 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
HLA-DOA-202ENST00000374813 PLXNA1Q9UIW2 1896 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L15C9J2P7 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L13C9JLJ4 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L11C9JVI0 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L18D6R9N7 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L22D6RA61 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L17D6RBQ6 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L19D6RCP7 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L20D6RJB6 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 GSTO1P78417 241 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP17L24Q0WX57 530 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 RAB30Q15771 203 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 ERICH6Q7L0X2 663 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 SLC44A5Q8NCS7 719 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 NPLOC4Q8TAT6 608 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 HERVK_113Q902F9 699 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 NECAB3Q96P71 396 aaPredicted RBP11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
HLA-DOA-202ENST00000374813 PDS5AQ29RF7 1337 aaKnown RBP11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 SMCHD1A6NHR9 2005 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 TIMP1P01033 207 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 PHKA1P46020 1223 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 PPIGQ13427 754 aaKnown RBP eCLIP11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 NCBP3Q53F19 620 aaKnown RBP11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 ANO1Q5XXA6 986 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 LBX2Q6XYB7 198 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 ANKRD33Q7Z3H0 272 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 RNF180Q86T96 592 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 SLC28A3Q9HAS3 691 aa11.62□□□□□ -0.55
HLA-DOA-202ENST00000374813 FANCIQ9NVI1 1328 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 ERC2O15083 957 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 CNMDO75829 334 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 RARBP10826 455 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 PBX2P40425 430 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 MECOMQ03112 1051 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 MFSD5Q6N075 450 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
HLA-DOA-202ENST00000374813 CIAO1O76071 339 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 ADORA2AP29274 412 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 USP14P54578 494 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 FAAP100Q0VG06 881 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 TMEM240Q5SV17 173 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 RASIP1Q5U651 963 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 TMEM199Q8N511 208 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 NUP133Q8WUM0 1156 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 MTIF3Q9H2K0 278 aaKnown RBP11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 XPNPEP3Q9NQH7 507 aa11.6□□□□□ -0.55
HLA-DOA-202ENST00000374813 GRXCR1A8MXD5 290 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 RFX5P48382 616 aaPredicted RBP11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 MRE11P49959 708 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 TFF2Q03403 129 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 PSRC1Q6PGN9 363 aaPredicted RBP11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 TSEN34Q9BSV6 310 aaKnown RBP11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 ZBTB21Q9ULJ3 1066 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 COG5Q9UP83 839 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 MROH7Q68CQ1 1323 aa11.59□□□□□ -0.55
HLA-DOA-202ENST00000374813 PRRC2BQ5JSZ5 2229 aaKnown RBP11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 BAG3O95817 575 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 PLCG2P16885 1265 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms