RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TADA2BQ86TJ2 420 aa19.67■□□□□ 0.74
LDLRAP1-201ENST00000374338 RABGGTAQ92696 567 aa19.67■□□□□ 0.74
LDLRAP1-201ENST00000374338 NAT10Q9H0A0 1025 aaKnown RBP19.67■□□□□ 0.74
LDLRAP1-201ENST00000374338 FBXO3Q9UK99 471 aa19.67■□□□□ 0.74
LDLRAP1-201ENST00000374338 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 SLC3A2P08195 630 aaKnown RBP19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 GNG11P61952 73 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 SHC4Q6S5L8 630 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 OXER1Q8TDS5 423 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 CCDC151A5D8V7 595 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 FANCCQ00597 558 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 FAN1Q9Y2M0 1017 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 PAPPAQ13219 1627 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 ABCC6O95255 1503 aa19.66■□□□□ 0.74
LDLRAP1-201ENST00000374338 PHACTR2O75167 634 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 PPP2R3AQ06190 1150 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 NCAPHQ15003 741 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 NTRK3Q16288 839 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 ZNF827Q17R98 1081 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 UQCRFS1P1P0C7P4 283 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 CELF1Q92879 486 aaKnown RBP19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 DESI2Q9BSY9 194 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 NUP98P52948 1817 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 MROH5Q6ZUA9 1318 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 NMT2O60551 498 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 KARSQ15046 597 aaKnown RBP19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 CFAP100Q494V2 611 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 FAM212AQ96EL1 285 aa19.65■□□□□ 0.74
LDLRAP1-201ENST00000374338 VWA3AA6NCI4 1184 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 AKNAD1Q5T1N1 836 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 USP49Q70CQ1 688 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 A0A087WUV0 522 aaPredicted RBP19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 LONRF3Q496Y0 759 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 CCDC152Q4G0S7 254 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 JAKMIP3Q5VZ66 844 aa19.64■□□□□ 0.73
LDLRAP1-201ENST00000374338 ABCA3Q99758 1704 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 ERVV-1B6SEH8 477 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 COBLO75128 1261 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 NTSR2O95665 410 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 SERPINC1P01008 464 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 CASP1P29466 404 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 SYKP43405 635 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 TRIM29Q14134 588 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 BRD3Q15059 726 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 KCNG4Q8TDN1 519 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 POLR3EQ9NVU0 708 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 A0A0U1RQJ8 604 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 ATRIPQ8WXE1 791 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 HSD3B7Q9H2F3 369 aa19.63■□□□□ 0.73
LDLRAP1-201ENST00000374338 CCDC196A0A1B0GTZ2 297 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 CCDC189A1A4V9 331 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 TXLNAP40222 546 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 MRFAP1Q9Y605 127 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 UBASH3AP57075 661 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 SSRP1Q08945 709 aaKnown RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 WTAPQ15007 396 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 DHX58Q96C10 678 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 GPR101Q96P66 508 aaPredicted RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 PUF60Q9UHX1 559 aaKnown RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 BEND6Q5SZJ8 279 aaPredicted RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 AMIGO3Q86WK7 504 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 FOXP4Q8IVH2 680 aaPredicted RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 DIS3L2Q8IYB7 885 aaKnown RBP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 KAT2BQ92831 832 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 VPS54Q9P1Q0 977 aa19.62■□□□□ 0.73
LDLRAP1-201ENST00000374338 ADKP55263 362 aaKnown RBP19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 SLC39A14Q15043 492 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 TOGARAM2Q6ZUX3 1019 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 GOLGA1Q92805 767 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 PCDHB6Q9Y5E3 794 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 PPFIA4O75335 1185 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 MNAT1P51948 309 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 DHX8Q14562 1220 aaKnown RBP19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 HDXQ7Z353 690 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 EGFL6Q8IUX8 553 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 PPP2R2CQ9Y2T4 447 aa19.61■□□□□ 0.73
LDLRAP1-201ENST00000374338 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 TOB1P50616 345 aaPredicted RBP19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 RTN1Q16799 776 aa19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 BRAPQ7Z569 592 aa19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 CNNM3Q8NE01 707 aa19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 STAMQ92783 540 aa19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 MYH14Q7Z406 1995 aaKnown RBP19.6■□□□□ 0.73
LDLRAP1-201ENST00000374338 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 LRP6O75581 1613 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 WNT7AO00755 349 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 YEATS4O95619 227 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 VEGFAP15692 232 aaPredicted RBP19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 PPARAQ07869 468 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 PTPAQ15257 358 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 690.5 ms