RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 CACNB3P54284 484 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 OTUD7BQ6GQQ9 843 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 TMTC3Q6ZXV5 915 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 OGFOD1Q8N543 542 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 PNMA1Q8ND90 353 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 CTCFLQ8NI51 663 aaPredicted RBP20.95■□□□□ 0.94
CD40-202ENST00000372285 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
CD40-202ENST00000372285 FIBPO43427 364 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 CIAPIN1Q6FI81 312 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 MTMR14Q8NCE2 650 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
CD40-202ENST00000372285 SPON1Q9HCB6 807 aa20.95■□□□□ 0.94
CD40-202ENST00000372285 ZBTB12Q9Y330 459 aaPredicted RBP20.95■□□□□ 0.94
CD40-202ENST00000372285 SHMT1P34896 483 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 KRT40Q6A162 431 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 ATL3Q6DD88 541 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 GJB4Q9NTQ9 266 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 ELP1O95163 1332 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 ATRNL1Q5VV63 1379 aa20.94■□□□□ 0.94
CD40-202ENST00000372285 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
CD40-202ENST00000372285 GADD45BO75293 160 aaPredicted RBP20.93■□□□□ 0.94
CD40-202ENST00000372285 KIF5BP33176 963 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 TCP10Q12799 353 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 TNIP1Q15025 636 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 DLGAP5Q15398 846 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 SH3BP5LQ7L8J4 393 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 CMTR1Q8N1G2 835 aaKnown RBP20.93■□□□□ 0.94
CD40-202ENST00000372285 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.93■□□□□ 0.94
CD40-202ENST00000372285 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
CD40-202ENST00000372285 IGKV6D-41A0A0C4DH26 115 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 DDTLA6NHG4 134 aaPredicted RBP20.92■□□□□ 0.94
CD40-202ENST00000372285 PLEKHA8P1O95397 391 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 GUCY1A2P33402 732 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 MMP14P50281 582 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 UBE2HP62256 183 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 KIF23Q02241 960 aaPredicted RBP20.92■□□□□ 0.94
CD40-202ENST00000372285 TRIM29Q14134 588 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 GRM4Q14833 912 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 GZF1Q9H116 711 aaPredicted RBP20.92■□□□□ 0.94
CD40-202ENST00000372285 TFIP11Q9UBB9 837 aaKnown RBP20.92■□□□□ 0.94
CD40-202ENST00000372285 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
CD40-202ENST00000372285 CCDC82Q8N4S0 544 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 CEP95Q96GE4 821 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 STX8Q9UNK0 236 aa20.92■□□□□ 0.94
CD40-202ENST00000372285 CNTNAP5Q8WYK1 1306 aa20.91■□□□□ 0.94
CD40-202ENST00000372285 TOP1P11387 765 aaKnown RBP20.91■□□□□ 0.94
CD40-202ENST00000372285 AKR1B1P15121 316 aa20.91■□□□□ 0.94
CD40-202ENST00000372285 FOXP4Q8IVH2 680 aaPredicted RBP20.91■□□□□ 0.94
CD40-202ENST00000372285 SRBD1Q8N5C6 995 aaKnown RBP20.91■□□□□ 0.94
CD40-202ENST00000372285 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
CD40-202ENST00000372285 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
CD40-202ENST00000372285 TMOD2Q9NZR1 351 aa20.91■□□□□ 0.94
CD40-202ENST00000372285 DICER1Q9UPY3 1922 aaKnown RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 MYH4Q9Y623 1939 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 GNAQP50148 359 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 AKAP17AQ02040 695 aaKnown RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 SPDYE2Q495Y8 402 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 LEO1Q8WVC0 666 aaPredicted RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 ZBED3Q96IU2 234 aaPredicted RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 SPATA32Q96LK8 384 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 DNAJC18Q9H819 358 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 MTMR4Q9NYA4 1195 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 ZNF70Q9UC06 446 aaPredicted RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 RPS12P25398 132 aaKnown RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 RASSF7Q02833 373 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 PKN1Q16512 942 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 FKBP1CQ5VVH2 108 aa20.9■□□□□ 0.94
CD40-202ENST00000372285 ZSCAN29Q8IWY8 852 aaPredicted RBP20.9■□□□□ 0.94
CD40-202ENST00000372285 KIF28PB7ZC32 967 aa20.89■□□□□ 0.93
CD40-202ENST00000372285 PRELPP51888 382 aa20.89■□□□□ 0.93
CD40-202ENST00000372285 MAD2L2Q9UI95 211 aa20.89■□□□□ 0.93
CD40-202ENST00000372285 V9GY48 417 aaPredicted RBP20.89■□□□□ 0.93
CD40-202ENST00000372285 FZD9O00144 591 aa20.88■□□□□ 0.93
CD40-202ENST00000372285 U2AF2P26368 475 aaKnown RBP eCLIP20.88■□□□□ 0.93
CD40-202ENST00000372285 CAVIN1Q6NZI2 390 aaKnown RBP20.88■□□□□ 0.93
CD40-202ENST00000372285 TATDN1Q6P1N9 297 aa20.88■□□□□ 0.93
CD40-202ENST00000372285 RBM27Q9P2N5 1060 aaKnown RBP20.88■□□□□ 0.93
CD40-202ENST00000372285 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
CD40-202ENST00000372285 PALM3A6NDB9 673 aaPredicted RBP20.87■□□□□ 0.93
CD40-202ENST00000372285 MMP1P03956 469 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 FAM151AQ8WW52 585 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 ZNF280AP59817 542 aaPredicted RBP20.87■□□□□ 0.93
CD40-202ENST00000372285 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 USP28Q96RU2 1077 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 LZTS2Q9BRK4 669 aa20.87■□□□□ 0.93
CD40-202ENST00000372285 CLRN2A0PK11 232 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 TTLL1O95922 423 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 XBP1P17861 261 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 SAFBQ15424 915 aaKnown RBP eCLIP20.86■□□□□ 0.93
CD40-202ENST00000372285 STAG2Q8N3U4 1231 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 TRIM34Q9BYJ4 488 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms