RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ALDH3A1P30838 453 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 KRT25Q7Z3Z0 450 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 MORC3Q14149 939 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 LONRF2Q1L5Z9 754 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 INTS8Q75QN2 995 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 BCAS4Q8TDM0 211 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 STIM2Q9P246 746 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 H7C1D1 291 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 GNGT1P63211 74 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 DYMQ7RTS9 669 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 FANCBQ8NB91 859 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 NLRC4Q9NPP4 1024 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 SPOPO43791 374 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 CROCCP2Q86T23 111 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 CABP7Q86V35 215 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 SYNCQ9H7C4 482 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 SEC31AO94979 1220 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 ATP5DP30049 168 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 KRT71Q3SY84 523 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 LINC00301Q8NCQ3 95 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 TLR7Q9NYK1 1049 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-202ENST00000357207 TTC37Q6PGP7 1564 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 DAAM2Q86T65 1068 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 PHLPP2Q6ZVD8 1323 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 FERMT1Q9BQL6 677 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 FRMD4BQ9Y2L6 1034 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 E7EVH7 732 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPARDQ03181 441 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
TRAPPC11-202ENST00000357207 TCP1P17987 556 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PARP10Q53GL7 1025 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 SFMBT2Q5VUG0 894 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 TRIM7Q9C029 511 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 CCDC151A5D8V7 595 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPFIA4O75335 1185 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 FLOT1O75955 427 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 HYOU1Q9Y4L1 999 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 IFNL3Q8IZI9 196 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 CARMIL3Q8ND23 1372 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPP6R2O75170 966 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 PDE6AP16499 860 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 RESTQ13127 1097 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 TEX11Q8IYF3 940 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 SLC35F6Q8N357 371 aa17.35■□□□□ 0.37
TRAPPC11-202ENST00000357207 CLCN6P51797 869 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 PLS1Q14651 629 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 SERPINA10Q9UK55 444 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 CASP14P31944 242 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 FBXO38Q6PIJ6 1188 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPFIBP2Q8ND30 876 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 DDB1Q16531 1140 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 HAUS3Q68CZ6 603 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 CAPS2Q9BXY5 557 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 GPCPD1Q9NPB8 672 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 ZDHHC9Q9Y397 364 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 CEP83Q9Y592 693 aa17.34■□□□□ 0.37
TRAPPC11-202ENST00000357207 GTPBP6O43824 516 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 ST5P78524 1137 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 PI4K2BQ8TCG2 481 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPANQ9NQ55 473 aaKnown RBP17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 NCBP1Q09161 790 aaKnown RBP17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 LRRC24Q50LG9 513 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 GSDMAQ96QA5 445 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 ORAI2Q96SN7 254 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 TCHPQ9BT92 498 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 CAPN7Q9Y6W3 813 aa17.33■□□□□ 0.37
TRAPPC11-202ENST00000357207 PPARAQ07869 468 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 DNAJC10Q8IXB1 793 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 PLEKHA4Q9H4M7 779 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 GUCY2FP51841 1108 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 CLNS1AP54105 237 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 UBL4BQ8N7F7 174 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms