RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 PLEKHG4BQ96PX9 1271 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 ZNF609O15014 1411 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 SMAPO00193 183 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
SP140-201ENST00000343805 PECAM1P16284 738 aaPredicted RBP9.93□□□□□ -0.82
SP140-201ENST00000343805 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 ZNF165P49910 485 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
SP140-201ENST00000343805 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 SMARCE1Q969G3 411 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 PURBQ96QR8 312 aaKnown RBP9.93□□□□□ -0.82
SP140-201ENST00000343805 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 C19orf44Q9H6X5 657 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 GJB4Q9NTQ9 266 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 PAG1Q9NWQ8 432 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 HMG20BQ9P0W2 317 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 KDM3BQ7LBC6 1761 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 MAPK1P28482 360 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 ECM1Q16610 540 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 MFSD4BQ5TF39 518 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 DCAF5Q96JK2 942 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 MCM8Q9UJA3 840 aa9.93□□□□□ -0.82
SP140-201ENST00000343805 A0A087WUV0 522 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 H2AFXP16104 143 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 KRT32Q14532 448 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 FBXO38Q6PIJ6 1188 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 JAZF1Q86VZ6 243 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 CACTIN-AS1Q8N1I8 211 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 KBTBD3Q8NAB2 608 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 C16orf45Q96MC5 204 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 PCDHGB7Q9Y5F8 929 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 PTPDC1A2A3K4 754 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 ME1P48163 572 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 SYNE4Q8N205 404 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 FAM163AQ96GL9 167 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 HAUS7Q99871 368 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 ABCF2Q9UG63 623 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 G3BP2Q9UN86 482 aaKnown RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 AKAP2Q9Y2D5 859 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 MEGF6O75095 1541 aa9.92□□□□□ -0.82
SP140-201ENST00000343805 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
SP140-201ENST00000343805 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 LRP10Q7Z4F1 713 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 TDRD7Q8NHU6 1098 aaKnown RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 L3MBTL3Q96JM7 780 aaPredicted RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 ZSCAN9O15535 394 aaPredicted RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 ADORA1P30542 326 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 CCNHP51946 323 aaPredicted RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 NCOA4Q13772 614 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 CCAR1Q8IX12 1150 aaKnown RBP9.91□□□□□ -0.82
SP140-201ENST00000343805 PLBD2Q8NHP8 589 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 C17orf50Q8WW18 174 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 USP28Q96RU2 1077 aa9.91□□□□□ -0.82
SP140-201ENST00000343805 H7C1W4 665 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 HSPD1P10809 573 aaKnown RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 CD46P15529 392 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 GPTP24298 496 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 FOXO4P98177 505 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 DDR1Q08345 913 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 RESTQ13127 1097 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 ARID5BQ14865 1188 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 CCDC181Q5TID7 509 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 ISM2Q6H9L7 571 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 GBP6Q6ZN66 633 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 ATG9AQ7Z3C6 839 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 FILIP1Q7Z7B0 1213 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 TADA2BQ86TJ2 420 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 STK11IPQ8N1F8 1099 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 CCDC112Q8NEF3 446 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 UTP6Q9NYH9 597 aaKnown RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 NCAPD2Q15021 1401 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 E7EWF7 191 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 RXRAP19793 462 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 MNAT1P51948 309 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
SP140-201ENST00000343805 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 TCP11Q8WWU5 503 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
SP140-201ENST00000343805 BECN2A8MW95 431 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 M0R2C6 588 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 CTDNEP1O95476 244 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms