RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.19
PMS1-201ENST00000342075 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.19
PMS1-201ENST00000342075 PHKBQ93100 1093 aa16.27■□□□□ 0.19
PMS1-201ENST00000342075 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.19
PMS1-201ENST00000342075 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 EPHX2P34913 555 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 SEPT2Q15019 361 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 GREB1LQ9C091 1923 aaPredicted RBP16.26■□□□□ 0.19
PMS1-201ENST00000342075 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 GH2P01242 217 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
PMS1-201ENST00000342075 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
PMS1-201ENST00000342075 hCG_1642624A0A1W2PR95 340 aa16.25■□□□□ 0.19
PMS1-201ENST00000342075 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
PMS1-201ENST00000342075 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
PMS1-201ENST00000342075 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
PMS1-201ENST00000342075 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
PMS1-201ENST00000342075 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
PMS1-201ENST00000342075 SMC3Q9UQE7 1217 aa16.25■□□□□ 0.19
PMS1-201ENST00000342075 COL2A1P02458 1487 aaPredicted RBP16.25■□□□□ 0.19
PMS1-201ENST00000342075 SSC5DA1L4H1 1573 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 TROAPQ12815 778 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 TNNI2P48788 182 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 PNMA1Q8ND90 353 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 CLIP2Q9UDT6 1046 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 RAD21O60216 631 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 INTS4Q96HW7 963 aaKnown RBP16.24■□□□□ 0.19
PMS1-201ENST00000342075 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
PMS1-201ENST00000342075 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
PMS1-201ENST00000342075 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
PMS1-201ENST00000342075 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
PMS1-201ENST00000342075 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
PMS1-201ENST00000342075 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
PMS1-201ENST00000342075 KAT14Q9H8E8 782 aa16.23■□□□□ 0.19
PMS1-201ENST00000342075 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
PMS1-201ENST00000342075 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
PMS1-201ENST00000342075 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
PMS1-201ENST00000342075 INPP5BP32019 993 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
PMS1-201ENST00000342075 PLIN4Q96Q06 1357 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
PMS1-201ENST00000342075 ECE1P42892 770 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 DGKZQ13574 1117 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 NTRK3Q16288 839 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 CATIPQ7Z7H3 387 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
PMS1-201ENST00000342075 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
PMS1-201ENST00000342075 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 RTN1Q16799 776 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 USP17L2Q6R6M4 530 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
PMS1-201ENST00000342075 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
PMS1-201ENST00000342075 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 CPLX1O14810 134 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 SLC35G1Q2M3R5 365 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 SYNE3Q6ZMZ3 975 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 ZKSCAN4Q969J2 545 aaPredicted RBP16.21■□□□□ 0.19
PMS1-201ENST00000342075 NMRK2Q9NPI5 230 aa16.21■□□□□ 0.19
PMS1-201ENST00000342075 USP17L5A8MUK1 530 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 SYT1P21579 422 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 MMP14P50281 582 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 MOB2Q70IA6 237 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 ACER1Q8TDN7 264 aa16.21■□□□□ 0.18
PMS1-201ENST00000342075 SCN4AP35499 1836 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 ICA1Q05084 483 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
PMS1-201ENST00000342075 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
PMS1-201ENST00000342075 VEGFAP15692 232 aaPredicted RBP16.2■□□□□ 0.18
PMS1-201ENST00000342075 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
PMS1-201ENST00000342075 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 ZBTB21Q9ULJ3 1066 aa16.2■□□□□ 0.18
PMS1-201ENST00000342075 TTLL1O95922 423 aa16.19■□□□□ 0.18
PMS1-201ENST00000342075 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
PMS1-201ENST00000342075 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms