RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TTLL1O95922 423 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 SSBP05455 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 CALML3P27482 149 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 KRT40Q6A162 431 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 USP17L2Q6R6M4 530 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 PSMD1Q99460 953 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 MYOZ2Q9NPC6 264 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 ZNF70Q9UC06 446 aaPredicted RBP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 PPP4CP60510 307 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 USH1GQ495M9 461 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 KRT2P35908 639 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
C2orf88-201ENST00000340623 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 WDHD1O75717 1129 aaPredicted RBP13.46□□□□□ -0.25
C2orf88-201ENST00000340623 LIFRP42702 1097 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 SEPT2Q15019 361 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.25
C2orf88-201ENST00000340623 KCTD1Q719H9 257 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 AGBL3Q8NEM8 1001 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 CEP95Q96GE4 821 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 TTC14Q96N46 770 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 AKR1B1P15121 316 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.25
C2orf88-201ENST00000340623 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 TNMDQ9H2S6 317 aa13.46□□□□□ -0.25
C2orf88-201ENST00000340623 C15orf52Q6ZUT6 534 aaKnown RBP13.46□□□□□ -0.26
C2orf88-201ENST00000340623 GPKOWQ92917 476 aaPredicted RBP eCLIP13.46□□□□□ -0.26
C2orf88-201ENST00000340623 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.26
C2orf88-201ENST00000340623 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.26
C2orf88-201ENST00000340623 GOPCQ9HD26 462 aa13.46□□□□□ -0.26
C2orf88-201ENST00000340623 DDAH1O94760 285 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
C2orf88-201ENST00000340623 SLC16A2P36021 539 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 DHX8Q14562 1220 aaKnown RBP13.45□□□□□ -0.26
C2orf88-201ENST00000340623 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 PDILTQ8N807 584 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
C2orf88-201ENST00000340623 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 GGA3Q9NZ52 723 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 NUP98P52948 1817 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 GNA11P29992 359 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 TPM4P67936 248 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 TSGA10IPQ3SY00 556 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
C2orf88-201ENST00000340623 NBPF9Q3BBW0 867 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
C2orf88-201ENST00000340623 ZNF592Q92610 1267 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 HOMER2Q9NSB8 354 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
C2orf88-201ENST00000340623 KRT26Q7Z3Y9 468 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 PDCL3Q9H2J4 239 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 SIPA1L3O60292 1781 aaPredicted RBP13.44□□□□□ -0.26
C2orf88-201ENST00000340623 PDS5AQ29RF7 1337 aaKnown RBP13.44□□□□□ -0.26
C2orf88-201ENST00000340623 CUL4AQ13619 759 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
C2orf88-201ENST00000340623 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 DGKHQ86XP1 1220 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 NUP62CLQ9H1M0 184 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
C2orf88-201ENST00000340623 KLRG2A4D1S0 409 aaPredicted RBP13.43□□□□□ -0.26
C2orf88-201ENST00000340623 IGSF3O75054 1194 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 KRT18P05783 430 aaKnown RBP13.43□□□□□ -0.26
C2orf88-201ENST00000340623 TRAF1Q13077 416 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 RPS12P25398 132 aaKnown RBP13.43□□□□□ -0.26
C2orf88-201ENST00000340623 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 THSD7AQ9UPZ6 1657 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 ORC4O43929 436 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms