RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 SLAIN1Q8ND83 568 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 TAOK2Q9UL54 1235 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 MYH8P13535 1937 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
VAPA-201ENST00000340541 GJA8P48165 433 aa18.46■□□□□ 0.55
VAPA-201ENST00000340541 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
VAPA-201ENST00000340541 SH3D19Q5HYK7 790 aa18.46■□□□□ 0.55
VAPA-201ENST00000340541 GIMAP6Q6P9H5 292 aa18.46■□□□□ 0.55
VAPA-201ENST00000340541 PROCA1Q8NCQ7 364 aaPredicted RBP18.46■□□□□ 0.55
VAPA-201ENST00000340541 AS3MTQ9HBK9 375 aa18.46■□□□□ 0.55
VAPA-201ENST00000340541 FOXP2O15409 715 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 MYCP01106 439 aaPredicted RBP18.45■□□□□ 0.54
VAPA-201ENST00000340541 GNAT2P19087 354 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 HMGCS2P54868 508 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 IRF5Q13568 498 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 MTFR1Q15390 333 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 ABCB5Q2M3G0 1257 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 TICAM2Q86XR7 235 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 PXYLP1Q8TE99 480 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 ARPP21Q9UBL0 812 aaPredicted RBP18.45■□□□□ 0.54
VAPA-201ENST00000340541 SWAP70Q9UH65 585 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 PNMA3Q9UL41 463 aa18.45■□□□□ 0.54
VAPA-201ENST00000340541 CCL5P13501 91 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 BACE1P56817 501 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 PRKCZQ05513 592 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 MTMR2Q13614 643 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 C16orf86Q6ZW13 317 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
VAPA-201ENST00000340541 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
VAPA-201ENST00000340541 BIN2Q9UBW5 565 aaPredicted RBP18.44■□□□□ 0.54
VAPA-201ENST00000340541 MGAMO43451 1857 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
VAPA-201ENST00000340541 CDK8P49336 464 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.54
VAPA-201ENST00000340541 CCDC129Q6ZRS4 1044 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 RNF208Q9H0X6 261 aa18.43■□□□□ 0.54
VAPA-201ENST00000340541 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 ADCY3O60266 1144 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 ECM2O94769 699 aaPredicted RBP18.42■□□□□ 0.54
VAPA-201ENST00000340541 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
VAPA-201ENST00000340541 SEPT2Q15019 361 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 AMOTL1Q8IY63 956 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 SHISA4Q96DD7 197 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
VAPA-201ENST00000340541 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 TNPO2O14787 897 aaKnown RBP18.41■□□□□ 0.54
VAPA-201ENST00000340541 AKR1B1P15121 316 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 FLT3LGP49771 235 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
VAPA-201ENST00000340541 RAB3GAP1Q15042 981 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 ACER1Q8TDN7 264 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 COA7Q96BR5 231 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 HTATIP2Q9BUP3 242 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
VAPA-201ENST00000340541 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
VAPA-201ENST00000340541 APPP05067 770 aa18.4■□□□□ 0.54
VAPA-201ENST00000340541 TDO2P48775 406 aa18.4■□□□□ 0.54
VAPA-201ENST00000340541 VPS53Q5VIR6 699 aa18.4■□□□□ 0.54
VAPA-201ENST00000340541 C12orf42Q96LP6 360 aa18.4■□□□□ 0.54
VAPA-201ENST00000340541 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 MPHOSPH10O00566 681 aaKnown RBP18.39■□□□□ 0.53
VAPA-201ENST00000340541 SGPL1O95470 568 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
VAPA-201ENST00000340541 SDSP20132 328 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 SIAH1Q8IUQ4 282 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 U2AF1L4Q8WU68 220 aaKnown RBP18.39■□□□□ 0.53
VAPA-201ENST00000340541 CCDC17Q96LX7 622 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 KIAA1683Q9H0B3 1180 aa18.39■□□□□ 0.53
VAPA-201ENST00000340541 H0YGN5 161 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 HOXA7P31268 230 aaPredicted RBP18.38■□□□□ 0.53
VAPA-201ENST00000340541 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 USP17L2Q6R6M4 530 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
VAPA-201ENST00000340541 CLEC10AQ8IUN9 316 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 DPF3Q92784 378 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
VAPA-201ENST00000340541 NACAP1Q9BZK3 213 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 ASCC2Q9H1I8 757 aaPredicted RBP18.38■□□□□ 0.53
VAPA-201ENST00000340541 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
VAPA-201ENST00000340541 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
VAPA-201ENST00000340541 RASA1P20936 1047 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms