RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 BACE1P56817 501 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 HAND2P61296 217 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 JAG1P78504 1218 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 ICA1Q05084 483 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 SEPT2Q15019 361 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 SHROOM1Q2M3G4 852 aaPredicted RBP24.3■■□□□ 1.48
MRPL40-201ENST00000333130 PPP4R3BQ5MIZ7 849 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 PROCA1Q8NCQ7 364 aaPredicted RBP24.3■■□□□ 1.48
MRPL40-201ENST00000333130 KANSL2Q9H9L4 492 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 ANO2Q9NQ90 1003 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 RNF186Q9NXI6 227 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 U3KPZ7 1027 aaPredicted RBP24.3■■□□□ 1.48
MRPL40-201ENST00000333130 MYH4Q9Y623 1939 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 CTCFP49711 727 aaPredicted RBP24.29■■□□□ 1.48
MRPL40-201ENST00000333130 NT5C2P49902 561 aa24.29■■□□□ 1.48
MRPL40-201ENST00000333130 MTMR2Q13614 643 aa24.29■■□□□ 1.48
MRPL40-201ENST00000333130 MFSD6Q6ZSS7 791 aa24.29■■□□□ 1.48
MRPL40-201ENST00000333130 IGF2BP3O00425 579 aaKnown RBP eCLIP24.29■■□□□ 1.48
MRPL40-201ENST00000333130 HMGCS2P54868 508 aa24.29■■□□□ 1.48
MRPL40-201ENST00000333130 PABPC4Q13310 644 aaKnown RBP eCLIP24.29■■□□□ 1.483e-18■■■□□ 16.4
MRPL40-201ENST00000333130 ANKRD23Q86SG2 305 aa24.29■■□□□ 1.48
MRPL40-201ENST00000333130 TSPY2A6NKD2 308 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 BTBD19C9JJ37 291 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 ORC4O43929 436 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 C8orf34Q49A92 452 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 AKNAD1Q5T1N1 836 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 USP17L2Q6R6M4 530 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 STAG1Q8WVM7 1258 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 NBPF3Q9H094 633 aa24.28■■□□□ 1.48
MRPL40-201ENST00000333130 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.28■■□□□ 1.48
MRPL40-201ENST00000333130 RANBP6O60518 1105 aaKnown RBP24.27■■□□□ 1.48
MRPL40-201ENST00000333130 REC8O95072 547 aa24.27■■□□□ 1.48
MRPL40-201ENST00000333130 TAF1CQ15572 869 aaPredicted RBP24.27■■□□□ 1.48
MRPL40-201ENST00000333130 SH3D19Q5HYK7 790 aa24.27■■□□□ 1.48
MRPL40-201ENST00000333130 PTPN18Q99952 460 aa24.27■■□□□ 1.48
MRPL40-201ENST00000333130 PNMA3Q9UL41 463 aa24.27■■□□□ 1.48
MRPL40-201ENST00000333130 AGTPBP1Q9UPW5 1226 aa24.27■■□□□ 1.48
MRPL40-201ENST00000333130 RBM8AQ9Y5S9 174 aaKnown RBP24.27■■□□□ 1.48
MRPL40-201ENST00000333130 PLIN4Q96Q06 1357 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 FOXN1O15353 648 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 EPB41L2O43491 1005 aaKnown RBP24.26■■□□□ 1.47
MRPL40-201ENST00000333130 FGRP09769 529 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 GUCY1A2P33402 732 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 ATP2B2Q01814 1243 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 RRP12Q5JTH9 1297 aaKnown RBP24.26■■□□□ 1.47
MRPL40-201ENST00000333130 FAM43AQ8N2R8 423 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 KIAA1683Q9H0B3 1180 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 ZFYVE28Q9HCC9 887 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 SLC45A1Q9Y2W3 748 aa24.26■■□□□ 1.47
MRPL40-201ENST00000333130 PDHXO00330 501 aa24.25■■□□□ 1.47
MRPL40-201ENST00000333130 TFAP4Q01664 338 aa24.25■■□□□ 1.47
MRPL40-201ENST00000333130 NEDD1Q8NHV4 660 aa24.25■■□□□ 1.47
MRPL40-201ENST00000333130 PARK7Q99497 189 aaKnown RBP24.25■■□□□ 1.47
MRPL40-201ENST00000333130 CFHR5Q9BXR6 569 aa24.25■■□□□ 1.47
MRPL40-201ENST00000333130 CNNM2Q9H8M5 875 aa24.25■■□□□ 1.47
MRPL40-201ENST00000333130 ZYXQ15942 572 aaKnown RBP24.24■■□□□ 1.47
MRPL40-201ENST00000333130 TBC1D10CQ8IV04 446 aa24.24■■□□□ 1.47
MRPL40-201ENST00000333130 ESR2Q92731 530 aa24.24■■□□□ 1.47
MRPL40-201ENST00000333130 TACC3Q9Y6A5 838 aa24.24■■□□□ 1.47
MRPL40-201ENST00000333130 CYP21A2P08686 494 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 TRDNQ13061 729 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 MOGSQ13724 837 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 NECTIN1Q15223 517 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 FAM47AQ5JRC9 791 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 KRT23Q9C075 422 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 GOPCQ9HD26 462 aa24.23■■□□□ 1.47
MRPL40-201ENST00000333130 TBC1D8O95759 1140 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 TTLL1O95922 423 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 EEF2P13639 858 aaKnown RBP24.22■■□□□ 1.47
MRPL40-201ENST00000333130 ACER1Q8TDN7 264 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 C12orf42Q96LP6 360 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 NYAP2Q9P242 653 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 TSKSQ9UJT2 592 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 TMX2Q9Y320 296 aa24.22■■□□□ 1.47
MRPL40-201ENST00000333130 EIF5BO60841 1220 aaKnown RBP24.21■■□□□ 1.47
MRPL40-201ENST00000333130 HSPA8P11142 646 aaKnown RBP24.21■■□□□ 1.47
MRPL40-201ENST00000333130 OSBPP22059 807 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 CRHR2Q13324 411 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 RNF20Q5VTR2 975 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 GPAT2Q6NUI2 795 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 CLEC10AQ8IUN9 316 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 LPAR1Q92633 364 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 CEP95Q96GE4 821 aa24.21■■□□□ 1.47
MRPL40-201ENST00000333130 IRX3P78415 501 aaPredicted RBP24.2■■□□□ 1.46
MRPL40-201ENST00000333130 SMCR8Q8TEV9 937 aaPredicted RBP24.2■■□□□ 1.46
MRPL40-201ENST00000333130 MTMR4Q9NYA4 1195 aa24.2■■□□□ 1.46
MRPL40-201ENST00000333130 SYNPO2Q9UMS6 1093 aa24.2■■□□□ 1.46
MRPL40-201ENST00000333130 IGKV6D-41A0A0C4DH26 115 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 CCDC178Q5BJE1 867 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 NOM1Q5C9Z4 860 aaKnown RBP24.19■■□□□ 1.46
MRPL40-201ENST00000333130 TREML2Q5T2D2 321 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 CREB3L3Q68CJ9 461 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 RALYLQ86SE5 291 aaKnown RBP24.19■■□□□ 1.46
MRPL40-201ENST00000333130 IQCA1Q86XH1 822 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.19■■□□□ 1.46
MRPL40-201ENST00000333130 VCPKMTQ9H867 229 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 INCENPQ9NQS7 918 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 EMILIN3Q9NT22 766 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 CLIP2Q9UDT6 1046 aa24.19■■□□□ 1.46
MRPL40-201ENST00000333130 STX8Q9UNK0 236 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms