RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TCP10L2B9ZVM9 353 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
SYNM-201ENST00000328642 GSDMDP57764 484 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 ANTXR2P58335 489 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 PKNOX2Q96KN3 472 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 SNAP25P60880 206 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 TMEM132AQ24JP5 1023 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 XDHP47989 1333 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 EXOSC10Q01780 885 aaKnown RBP18.16■□□□□ 0.5
SYNM-201ENST00000328642 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 CUL5Q93034 780 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 GJD4Q96KN9 370 aaPredicted RBP18.16■□□□□ 0.5
SYNM-201ENST00000328642 EPB41L4AQ9HCS5 686 aaPredicted RBP18.16■□□□□ 0.5
SYNM-201ENST00000328642 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 THRAP3Q9Y2W1 955 aaKnown RBP18.16■□□□□ 0.5
SYNM-201ENST00000328642 OVOS2A0A0G2JMS6 1433 aa18.16■□□□□ 0.5
SYNM-201ENST00000328642 ATP1A3P13637 1013 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 SLC39A14Q15043 492 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 SMARCC2Q8TAQ2 1214 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 MYO1BO43795 1136 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 FAM193AP78312 1265 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 TTLL12Q14166 644 aaPredicted RBP18.15■□□□□ 0.5
SYNM-201ENST00000328642 ATL3Q6DD88 541 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 MAEAQ7L5Y9 396 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 ARGLU1Q9NWB6 273 aaPredicted RBP18.15■□□□□ 0.5
SYNM-201ENST00000328642 ARPP21Q9UBL0 812 aaPredicted RBP18.15■□□□□ 0.5
SYNM-201ENST00000328642 RAD17O75943 681 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 NTSR2O95665 410 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 SCG2P13521 617 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 COA7Q96BR5 231 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 LY9Q9HBG7 655 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 GNA11P29992 359 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 TECP42680 631 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYNM-201ENST00000328642 ST3GAL1Q11201 340 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
SYNM-201ENST00000328642 TAB2Q9NYJ8 693 aa18.15■□□□□ 0.5
SYNM-201ENST00000328642 GDF11O95390 407 aa18.14■□□□□ 0.49
SYNM-201ENST00000328642 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.14■□□□□ 0.49
SYNM-201ENST00000328642 FOXN1O15353 648 aa18.14■□□□□ 0.49
SYNM-201ENST00000328642 CMA1P23946 247 aa18.14■□□□□ 0.49
SYNM-201ENST00000328642 NLRP12P59046 1061 aa18.14■□□□□ 0.49
SYNM-201ENST00000328642 UBXN1Q04323 297 aa18.14■□□□□ 0.49
SYNM-201ENST00000328642 CT47A1Q5JQC4 288 aaPredicted RBP18.14■□□□□ 0.49
SYNM-201ENST00000328642 SYMPKQ92797 1274 aaKnown RBP18.14■□□□□ 0.49
SYNM-201ENST00000328642 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
SYNM-201ENST00000328642 GOLGA6L1Q8N7Z2 621 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 FDPSP14324 419 aaKnown RBP18.13■□□□□ 0.49
SYNM-201ENST00000328642 IFNAR1P17181 557 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 FKBP15Q5T1M5 1219 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 KRT79Q5XKE5 535 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 TNNT3P45378 269 aaPredicted RBP18.13■□□□□ 0.49
SYNM-201ENST00000328642 GRAPQ13588 217 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
SYNM-201ENST00000328642 GRAPLQ8TC17 118 aaPredicted RBP18.13■□□□□ 0.49
SYNM-201ENST00000328642 DDX39AO00148 427 aaKnown RBP18.12■□□□□ 0.49
SYNM-201ENST00000328642 ZSCAN12O43309 604 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 PDE4DQ08499 809 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 TEKT1Q969V4 418 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 SPDYE3A6NKU9 549 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 PSMA7O14818 248 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 PPEF1O14829 653 aaPredicted RBP18.12■□□□□ 0.49
SYNM-201ENST00000328642 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 CASQ1P31415 396 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 PPP4R3BQ5MIZ7 849 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 DESI2Q9BSY9 194 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 NCOA3Q9Y6Q9 1424 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
SYNM-201ENST00000328642 CFBP00751 764 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 USP8P40818 1118 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
SYNM-201ENST00000328642 POLD4Q9HCU8 107 aa18.12■□□□□ 0.49
SYNM-201ENST00000328642 BMP15O95972 392 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 CCP110O43303 1012 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 KIF5CO60282 957 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 FMNL1O95466 1100 aaPredicted RBP18.11■□□□□ 0.49
SYNM-201ENST00000328642 UBXN2AP68543 259 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
SYNM-201ENST00000328642 MMP1P03956 469 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 GPSM2P81274 684 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 AMPD3Q01432 767 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 NELFCDQ8IXH7 590 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
SYNM-201ENST00000328642 PIGSQ96S52 555 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.1■□□□□ 0.493e-10■■■■■ 153.8
SYNM-201ENST00000328642 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 NONOQ15233 471 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms