RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RTFDC1Q9BY42 306 aaPredicted RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 BBOX1O75936 387 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 CMA1P23946 247 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 CTCFLQ8NI51 663 aaPredicted RBP14.29□□□□□ -0.12
RNF4-201ENST00000314289 MYH6P13533 1939 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 CTAGE5O15320 804 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 FOXN1O15353 648 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 ORC4O43929 436 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 TEX11Q8IYF3 940 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 AOPEPQ8N6M6 819 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 PRIMPOLQ96LW4 560 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 SRCAPQ6ZRS2 3230 aa14.29□□□□□ -0.12
RNF4-201ENST00000314289 BECN2A8MW95 431 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 TSPY3P0CV98 308 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 TSPY8P0CW00 308 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 PNOCQ13519 176 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 IQCB1Q15051 598 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
RNF4-201ENST00000314289 KIAA1468Q9P260 1216 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 SCNN1DP51172 638 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
RNF4-201ENST00000314289 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 GPKOWQ92917 476 aaPredicted RBP eCLIP14.28□□□□□ -0.12
RNF4-201ENST00000314289 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF4-201ENST00000314289 PTGS1P23219 599 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 LONRF3Q496Y0 759 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 KAT14Q9H8E8 782 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 KCNQ5Q9NR82 932 aa14.28□□□□□ -0.12
RNF4-201ENST00000314289 NID2Q14112 1375 aa14.27□□□□□ -0.12
RNF4-201ENST00000314289 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.12
RNF4-201ENST00000314289 IL1R1P14778 569 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 GSTO1P78417 241 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 PPP4R3BQ5MIZ7 849 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.13
RNF4-201ENST00000314289 GRAMD1CQ8IYS0 662 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 MTA3Q9BTC8 594 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 FOXP1Q9H334 677 aaPredicted RBP14.27□□□□□ -0.13
RNF4-201ENST00000314289 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.13
RNF4-201ENST00000314289 CNTNAP5Q8WYK1 1306 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 SRGNP10124 158 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
RNF4-201ENST00000314289 JMYQ8N9B5 988 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 ANO10Q9NW15 660 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
RNF4-201ENST00000314289 PPP6R2O75170 966 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 LRMPQ12912 555 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 ZNF174Q15697 407 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 CCDC186Q7Z3E2 898 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
RNF4-201ENST00000314289 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 LDHCP07864 332 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 ZNF75DP51815 510 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
RNF4-201ENST00000314289 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 CERS5Q8N5B7 392 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 PHF20Q9BVI0 1012 aa14.26□□□□□ -0.13
RNF4-201ENST00000314289 ZC3H12CQ9C0D7 883 aaKnown RBP14.26□□□□□ -0.13
RNF4-201ENST00000314289 DDAH1O94760 285 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 KRT2P35908 639 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
RNF4-201ENST00000314289 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 CEP57L1Q8IYX8 460 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 PYCARDQ9ULZ3 195 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 FLT1P17948 1338 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 PCP11498 1178 aaKnown RBP14.25□□□□□ -0.13
RNF4-201ENST00000314289 XBP1P17861 261 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 RASA1P20936 1047 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 NLGN1Q8N2Q7 840 aa14.25□□□□□ -0.13
RNF4-201ENST00000314289 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
RNF4-201ENST00000314289 KIAA1551Q9HCM1 1747 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 G3V3G9 751 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
RNF4-201ENST00000314289 CALM1P0DP23 149 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 CALM2P0DP24 149 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 CALM3P0DP25 149 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 RHBDL3P58872 404 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 NLRP5P59047 1200 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 ARID5BQ14865 1188 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 HSP90AA4PQ58FG1 418 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 DPP8Q6V1X1 898 aaPredicted RBP14.24□□□□□ -0.13
RNF4-201ENST00000314289 PIK3AP1Q6ZUJ8 805 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 FOXP4Q8IVH2 680 aaPredicted RBP14.24□□□□□ -0.13
RNF4-201ENST00000314289 CNNM3Q8NE01 707 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
RNF4-201ENST00000314289 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms