RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 DDTLA6NHG4 134 aaPredicted RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 GNAQP50148 359 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 PNMA1Q8ND90 353 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 C8orf76Q96K31 380 aa16.42■□□□□ 0.22
EIF3F-201ENST00000309828 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
EIF3F-201ENST00000309828 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
EIF3F-201ENST00000309828 TNNI2P48788 182 aa16.41■□□□□ 0.22
EIF3F-201ENST00000309828 GMPSP49915 693 aaPredicted RBP16.41■□□□□ 0.22
EIF3F-201ENST00000309828 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
EIF3F-201ENST00000309828 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
EIF3F-201ENST00000309828 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
EIF3F-201ENST00000309828 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
EIF3F-201ENST00000309828 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 WNT10BO00744 389 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 DTNBO60941 627 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 DEXIO95424 95 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 AKR1B1P15121 316 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 GRM4Q14833 912 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
EIF3F-201ENST00000309828 MCTP1Q6DN14 999 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 GPC2Q8N158 579 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 CEP95Q96GE4 821 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
EIF3F-201ENST00000309828 SLC26A6Q9BXS9 759 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
EIF3F-201ENST00000309828 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 MYH8P13535 1937 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 ZNF541Q9H0D2 1346 aa16.4■□□□□ 0.22
EIF3F-201ENST00000309828 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
EIF3F-201ENST00000309828 PRPF3O43395 683 aaKnown RBP16.39■□□□□ 0.21
EIF3F-201ENST00000309828 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
EIF3F-201ENST00000309828 RESTQ13127 1097 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
EIF3F-201ENST00000309828 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 PHKBQ93100 1093 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 CSRNP1Q96S65 589 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
EIF3F-201ENST00000309828 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
EIF3F-201ENST00000309828 H7C1D1 291 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 TBC1D12O60347 775 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 TTLL1O95922 423 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 FUT2Q10981 343 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 TRIM29Q14134 588 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 TMEM87AQ8NBN3 555 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
EIF3F-201ENST00000309828 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 KRT85P78386 507 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 ATL3Q6DD88 541 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 TMEM179Q6ZVK1 233 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 KANSL2Q9H9L4 492 aa16.37■□□□□ 0.21
EIF3F-201ENST00000309828 SBF1O95248 1867 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
EIF3F-201ENST00000309828 PLEKHA8P1O95397 391 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 XBP1P17861 261 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 BRAPQ7Z569 592 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 LMBRD1Q9NUN5 540 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 CNTNAP5Q8WYK1 1306 aa16.36■□□□□ 0.21
EIF3F-201ENST00000309828 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 PPFIA3O75145 1194 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.213e-14■□□□□ 10.7
EIF3F-201ENST00000309828 MAP3K10Q02779 954 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 KRT40Q6A162 431 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 FAM177A1Q8N128 213 aaPredicted RBP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 MKL1Q969V6 931 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
EIF3F-201ENST00000309828 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 SYNPO2Q9UMS6 1093 aa16.35■□□□□ 0.21
EIF3F-201ENST00000309828 TRAK2O60296 914 aa16.34■□□□□ 0.21
EIF3F-201ENST00000309828 FOSBP53539 338 aa16.34■□□□□ 0.21
EIF3F-201ENST00000309828 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
EIF3F-201ENST00000309828 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms