RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
XCR1-201ENST00000309285 PICALMQ13492 652 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 AKNAD1Q5T1N1 836 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 SDR42E1Q8WUS8 393 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 CLEC11AQ9Y240 323 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 KCNQ2O43526 872 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 TRIM21P19474 475 aaKnown RBP10.42□□□□□ -0.74
XCR1-201ENST00000309285 CASP7P55210 303 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 GOLGA5Q8TBA6 731 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 FBF1Q8TES7 1133 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 NAP1L3Q99457 506 aaPredicted RBP10.42□□□□□ -0.74
XCR1-201ENST00000309285 RIPOR2Q9Y4F9 1068 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 CAPN7Q9Y6W3 813 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 LTN1O94822 1766 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 CTAGE9A4FU28 777 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 YEATS4O95619 227 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 USPL1Q5W0Q7 1092 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 MMRN2Q9H8L6 949 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 DENND2AQ9ULE3 1009 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 PYCARDQ9ULZ3 195 aa10.42□□□□□ -0.74
XCR1-201ENST00000309285 RPAP1Q9BWH6 1393 aaPredicted RBP10.41□□□□□ -0.74
XCR1-201ENST00000309285 CCDC160A6NGH7 325 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 HIBADHP31937 336 aaKnown RBP10.41□□□□□ -0.74
XCR1-201ENST00000309285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.41□□□□□ -0.74
XCR1-201ENST00000309285 PSMD1Q99460 953 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 MCM9Q9NXL9 1143 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 NWD1Q149M9 1564 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
XCR1-201ENST00000309285 BUB1BO60566 1050 aaPredicted RBP10.41□□□□□ -0.74
XCR1-201ENST00000309285 PPARDQ03181 441 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 KRT40Q6A162 431 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 B4GALNT4Q76KP1 1039 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CAPZA3Q96KX2 299 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CPLX4Q7Z7G2 160 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 FBXO18Q8NFZ0 1043 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CBX8Q9HC52 389 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CDHR2Q9BYE9 1310 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 CCDC40Q4G0X9 1142 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 ZNF569Q5MCW4 686 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 TCHPQ9BT92 498 aa10.41□□□□□ -0.74
XCR1-201ENST00000309285 PALLDQ8WX93 1383 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 A0A0G2JLW4 131 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 PRKAB2O43741 272 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 TRAPPC3LQ5T215 181 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
XCR1-201ENST00000309285 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 USP21Q9UK80 565 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.4□□□□□ -0.74
XCR1-201ENST00000309285 MYO1CO00159 1063 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 MYO1BO43795 1136 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 CSF1RP07333 972 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 AATFQ9NY61 560 aaKnown RBP eCLIP10.4□□□□□ -0.74
XCR1-201ENST00000309285 ELP1O95163 1332 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 USO1O60763 962 aaKnown RBP10.4□□□□□ -0.74
XCR1-201ENST00000309285 ZNF75DP51815 510 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 GJB4Q9NTQ9 266 aa10.4□□□□□ -0.74
XCR1-201ENST00000309285 PRPF4BQ13523 1007 aaKnown RBP10.4□□□□□ -0.75
XCR1-201ENST00000309285 RNF168Q8IYW5 571 aaPredicted RBP10.4□□□□□ -0.75
XCR1-201ENST00000309285 SECISBP2LQ93073 1101 aaKnown RBP10.4□□□□□ -0.75
XCR1-201ENST00000309285 CALML4Q96GE6 196 aa10.4□□□□□ -0.75
XCR1-201ENST00000309285 VEZTQ9HBM0 779 aa10.4□□□□□ -0.75
XCR1-201ENST00000309285 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.75
XCR1-201ENST00000309285 CHD2O14647 1828 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 ST5P78524 1137 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 RESTQ13127 1097 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 NAA15Q9BXJ9 866 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 PPP1R12CQ9BZL4 782 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 CARMIL3Q8ND23 1372 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 ZWINTO95229 277 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 CTNNA2P26232 953 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 DIS3L2Q8IYB7 885 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 CNBD1Q8NA66 436 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 ANKRD65E5RJM6 399 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 PLA2G12BQ9BX93 195 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 SPATS2LQ9NUQ6 558 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.39□□□□□ -0.75
XCR1-201ENST00000309285 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 GOLGA6CA6NDK9 693 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 GOLGA6DP0CG33 693 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 CKAP4Q07065 602 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 PNMA8AQ86V59 439 aaPredicted RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 STRBPQ96SI9 672 aaKnown RBP10.39□□□□□ -0.75
XCR1-201ENST00000309285 GOLGA6AQ9NYA3 693 aa10.39□□□□□ -0.75
XCR1-201ENST00000309285 TSPY3P0CV98 308 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms