RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 FTOQ9C0B1 505 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 TBC1D8BQ0IIM8 1120 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 RESTQ13127 1097 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 SNX29Q8TEQ0 813 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 GOLGA8HP0CJ92 632 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 KRT13P13646 458 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CETN2P41208 172 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 KIF5AQ12840 1032 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 NEK11Q8NG66 645 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 COL15A1P39059 1388 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 TRAF5O00463 557 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 KRT86O43790 486 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CALCRLQ16602 461 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 KRBA2Q6ZNG9 492 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CABP7Q86V35 215 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 V9GYY5 206 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTAGE15A4D2H0 777 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTAGE9A4FU28 777 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 KCNQ2O43526 872 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTAGE8P0CG41 777 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 DLGAP5Q15398 846 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 INF2Q27J81 1249 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTAGE6Q86UF2 777 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 BICD1Q96G01 975 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 NOC4LQ9BVI4 516 aaKnown RBP12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 PRM3Q9NNZ6 103 aa12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.35
PCDHGC3-201ENST00000308177 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 CYP2D7A0A087X1C5 515 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 ARID5AQ03989 594 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 GRAPQ13588 217 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 TMC4Q7Z404 712 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 RICTORQ6R327 1708 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 TACC1O75410 805 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 MECOMQ03112 1051 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 MRVI1Q9Y6F6 885 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 PPEF1O14829 653 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 PPP6R2O75170 966 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 PTGDRQ13258 359 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 IFI16Q16666 785 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 GUCA1BQ9UMX6 200 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
PCDHGC3-201ENST00000308177 SCARF1Q14162 830 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 PLS1Q14651 629 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 GALNT17Q6IS24 598 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 USP37Q86T82 979 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 TBC1D5Q92609 795 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 UTYO14607 1347 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 CKAP4Q07065 602 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZNF569Q5MCW4 686 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC3-201ENST00000308177 TRIM14Q14142 442 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 USH1GQ495M9 461 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 FRMPD2Q68DX3 1309 aaPredicted RBP12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZBTB21Q9ULJ3 1066 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms