RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 TMTC3Q6ZXV5 915 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 CCAR2Q8N163 923 aaKnown RBP18.82■□□□□ 0.6
SYVN1-202ENST00000307289 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
SYVN1-202ENST00000307289 NYXQ9GZU5 481 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 SRPRBQ9Y5M8 271 aaKnown RBP18.82■□□□□ 0.6
SYVN1-202ENST00000307289 ACTN4O43707 911 aaKnown RBP18.82■□□□□ 0.6
SYVN1-202ENST00000307289 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 CEP135Q66GS9 1140 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 USP21Q9UK80 565 aa18.82■□□□□ 0.6
SYVN1-202ENST00000307289 MYH6P13533 1939 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 PRPF3O43395 683 aaKnown RBP18.81■□□□□ 0.6
SYVN1-202ENST00000307289 TOM1O60784 492 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 DZIP1Q86YF9 867 aaKnown RBP18.81■□□□□ 0.6
SYVN1-202ENST00000307289 SMYD4Q8IYR2 804 aaPredicted RBP18.81■□□□□ 0.6
SYVN1-202ENST00000307289 STAG2Q8N3U4 1231 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
SYVN1-202ENST00000307289 IL17RBQ9NRM6 502 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.81■□□□□ 0.61e-8■□□□□ 11
SYVN1-202ENST00000307289 V9GYY5 206 aaPredicted RBP18.81■□□□□ 0.6
SYVN1-202ENST00000307289 CNTNAP5Q8WYK1 1306 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 IRS2Q9Y4H2 1338 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 USP17L3A6NCW0 530 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 USP17L4A6NCW7 530 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 IKBKBO14920 756 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 KRT2P35908 639 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 USP17L1Q7RTZ2 530 aa18.81■□□□□ 0.6
SYVN1-202ENST00000307289 GPKOWQ92917 476 aaPredicted RBP eCLIP18.81■□□□□ 0.69e-6■■□□□ 14.5
SYVN1-202ENST00000307289 RFC4P35249 363 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 RASGRP4Q8TDF6 673 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 CPVLQ9H3G5 476 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 SAP30BPQ9UHR5 308 aaKnown RBP18.8■□□□□ 0.6
SYVN1-202ENST00000307289 TRIM75PA6NK02 468 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 CDC25AP30304 524 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 NYAP1Q6ZVC0 841 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 SYMPKQ92797 1274 aaKnown RBP18.8■□□□□ 0.6
SYVN1-202ENST00000307289 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
SYVN1-202ENST00000307289 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
SYVN1-202ENST00000307289 OLFM4Q6UX06 510 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 SAMSN1Q9NSI8 373 aaKnown RBP18.79■□□□□ 0.6
SYVN1-202ENST00000307289 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
SYVN1-202ENST00000307289 VWA3AA6NCI4 1184 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 TFAP4Q01664 338 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 TNFRSF25Q93038 417 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
SYVN1-202ENST00000307289 SFPQP23246 707 aaKnown RBP eCLIP18.78■□□□□ 0.6
SYVN1-202ENST00000307289 PLCD1P51178 756 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 PTPN14Q15678 1187 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 BTAF1O14981 1849 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 RCAN1P53805 252 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 STX17P56962 302 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 SLC35G1Q2M3R5 365 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 TGFBRAP1Q8WUH2 860 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 NFE2L3Q9Y4A8 694 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 SARSP49591 514 aaKnown RBP18.78■□□□□ 0.6
SYVN1-202ENST00000307289 TPM4P67936 248 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 PTGDRQ13258 359 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 IL17AQ16552 155 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 KLHL10Q6JEL2 608 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 TYW1BQ6NUM6 668 aa18.78■□□□□ 0.6
SYVN1-202ENST00000307289 SEMA3EO15041 775 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 CTIFO43310 598 aaKnown RBP18.77■□□□□ 0.6
SYVN1-202ENST00000307289 ORC4O43929 436 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 NEMFO60524 1076 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
SYVN1-202ENST00000307289 MCM7P33993 719 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 USP5P45974 858 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 CTCFLQ8NI51 663 aaPredicted RBP18.77■□□□□ 0.6
SYVN1-202ENST00000307289 SMARCE1Q969G3 411 aa18.77■□□□□ 0.6
SYVN1-202ENST00000307289 GSDMDP57764 484 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 NCBP1Q09161 790 aaKnown RBP18.77■□□□□ 0.59
SYVN1-202ENST00000307289 MORC3Q14149 939 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 MAPKAPK5Q8IW41 473 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 ATP8A2Q9NTI2 1148 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 IMPACTQ9P2X3 320 aa18.77■□□□□ 0.59
SYVN1-202ENST00000307289 PPP1R13BQ96KQ4 1090 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
SYVN1-202ENST00000307289 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 LDHBP07195 334 aaKnown RBP18.76■□□□□ 0.59
SYVN1-202ENST00000307289 GOLGA8HP0CJ92 632 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 NLRP5P59047 1200 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 FNBP4Q8N3X1 1017 aaPredicted RBP18.76■□□□□ 0.59
SYVN1-202ENST00000307289 CCDC112Q8NEF3 446 aa18.76■□□□□ 0.59
SYVN1-202ENST00000307289 XBP1P17861 261 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 GPSM2P81274 684 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 TTC38Q5R3I4 469 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
SYVN1-202ENST00000307289 DDAH1O94760 285 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 SCG2P13521 617 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 C12orf60Q5U649 245 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 CNBD1Q8NA66 436 aa18.75■□□□□ 0.59
SYVN1-202ENST00000307289 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms