RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 NID2Q14112 1375 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
SCG2-201ENST00000305409 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 FLT1P17948 1338 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 CLCN1P35523 988 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 PNMA1Q8ND90 353 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SCG2-201ENST00000305409 TTF2Q9UNY4 1162 aaKnown RBP13.13□□□□□ -0.31
SCG2-201ENST00000305409 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 PCP11498 1178 aaKnown RBP13.12□□□□□ -0.31
SCG2-201ENST00000305409 RASA1P20936 1047 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 CDK8P49336 464 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 CLEC10AQ8IUN9 316 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
SCG2-201ENST00000305409 DDAH1O94760 285 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 CMA1P23946 247 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
SCG2-201ENST00000305409 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
SCG2-201ENST00000305409 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
SCG2-201ENST00000305409 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
SCG2-201ENST00000305409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCG2-201ENST00000305409 SYKP43405 635 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 CACNB3P54284 484 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 EIF6P56537 245 aaKnown RBP13.11□□□□□ -0.31
SCG2-201ENST00000305409 USP49Q70CQ1 688 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
SCG2-201ENST00000305409 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
SCG2-201ENST00000305409 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
SCG2-201ENST00000305409 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 FOXN1O15353 648 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 PDE6BP35913 854 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 SLC35G1Q2M3R5 365 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 PDILTQ8N807 584 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 EYA3Q99504 573 aa13.11□□□□□ -0.31
SCG2-201ENST00000305409 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 CTAGE5O15320 804 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 CALM1P0DP23 149 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 CALM2P0DP24 149 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 CALM3P0DP25 149 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 RCAN1P53805 252 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 PNOCQ13519 176 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 ZNF174Q15697 407 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 STX1AQ16623 288 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 COA1Q9GZY4 146 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 PPP6R2O75170 966 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 KRT2P35908 639 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 NPY5RQ15761 445 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 KIAA0825Q8IV33 1275 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 TBC1D22AQ8WUA7 517 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 ZKSCAN5Q9Y2L8 839 aa13.1□□□□□ -0.31
SCG2-201ENST00000305409 NLRP5P59047 1200 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 IQCB1Q15051 598 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 JMYQ8N9B5 988 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 KRI1Q8N9T8 703 aaKnown RBP13.09□□□□□ -0.31
SCG2-201ENST00000305409 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 XBP1P17861 261 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
SCG2-201ENST00000305409 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 MAD2L2Q9UI95 211 aa13.09□□□□□ -0.31
SCG2-201ENST00000305409 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.31
SCG2-201ENST00000305409 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.31
SCG2-201ENST00000305409 BECN2A8MW95 431 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 CYTH3O43739 400 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 SCG2P13521 617 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 NFIAQ12857 509 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 RILPL1Q5EBL4 403 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 DHX40Q8IX18 779 aaKnown RBP13.08□□□□□ -0.32
SCG2-201ENST00000305409 DRC7Q8IY82 874 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
SCG2-201ENST00000305409 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
SCG2-201ENST00000305409 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 GAKO14976 1311 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
SCG2-201ENST00000305409 H0YIN7 160 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms