RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 C12orf60Q5U649 245 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 ATRNO75882 1429 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 H0YIN7 160 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 AP5Z1O43299 807 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 ZNF75DP51815 510 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 SEC23AQ15436 765 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 STAG2Q8N3U4 1231 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 LRMPQ12912 555 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 LONRF3Q496Y0 759 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 DDAH1O94760 285 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 PDE6BP35913 854 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 SHC4Q6S5L8 630 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 GRIN1Q05586 938 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 IFNKQ9P0W0 207 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
PPP4R4-201ENST00000304338 SMTNL1A8MU46 457 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 TPM3P06753 285 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 TROAPQ12815 778 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 KLRF2D3W0D1 207 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 CDC25AP30304 524 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 CDK8P49336 464 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 TMC6Q7Z403 805 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 COL1A1P02452 1464 aaPredicted RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 TXLNAP40222 546 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 GNAQP50148 359 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
PPP4R4-201ENST00000304338 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 PRPF3O43395 683 aaKnown RBP17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■□□□ 13.7
PPP4R4-201ENST00000304338 PCDHA5Q9Y5H7 936 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 FOXN1O15353 648 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 CHRNA5P30532 468 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 PPP6R2O75170 966 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 STX17P56962 302 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 FAM196BA6NMK8 535 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 ORC4O43929 436 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 PTGDRQ13258 359 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 EPSTI1Q96J88 318 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
PPP4R4-201ENST00000304338 TAF1P21675 1872 aa17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 C16orf45Q96MC5 204 aaPredicted RBP17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 NPR1P16066 1061 aa17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
PPP4R4-201ENST00000304338 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.34
PPP4R4-201ENST00000304338 CALML3P27482 149 aa17.21■□□□□ 0.34
PPP4R4-201ENST00000304338 KRBA2Q6ZNG9 492 aa17.21■□□□□ 0.34
PPP4R4-201ENST00000304338 NBPF11Q86T75 865 aa17.21■□□□□ 0.34
PPP4R4-201ENST00000304338 PROM2Q8N271 834 aa17.21■□□□□ 0.34
PPP4R4-201ENST00000304338 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 TRMT44Q8IYL2 757 aaKnown RBP17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 NLRP12P59046 1061 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 CASP1P29466 404 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 PYCARDQ9ULZ3 195 aa17.2■□□□□ 0.34
PPP4R4-201ENST00000304338 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 INF2Q27J81 1249 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 POSTNQ15063 836 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 COA1Q9GZY4 146 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
PPP4R4-201ENST00000304338 DAGLAQ9Y4D2 1042 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms