RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 ZNF75DP51815 510 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 FUT2Q10981 343 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 ARID5BQ14865 1188 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 AMOTL1Q8IY63 956 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 RTFDC1Q9BY42 306 aaPredicted RBP16.76■□□□□ 0.27
SMG8-201ENST00000300917 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
SMG8-201ENST00000300917 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 KCNH3Q9ULD8 1083 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 BBOX1O75936 387 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 NLRP5P59047 1200 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
SMG8-201ENST00000300917 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 CLIP2Q9UDT6 1046 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 POLR2DO15514 142 aaKnown RBP16.75■□□□□ 0.27
SMG8-201ENST00000300917 ORC4O43929 436 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 XBP1P17861 261 aa16.75■□□□□ 0.27
SMG8-201ENST00000300917 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
SMG8-201ENST00000300917 GSTO1P78417 241 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 HOMER1Q86YM7 354 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
SMG8-201ENST00000300917 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 LDHCP07864 332 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 KRT2P35908 639 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 SBF2Q86WG5 1849 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 CASP1P29466 404 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 STAMQ92783 540 aa16.74■□□□□ 0.27
SMG8-201ENST00000300917 DUOX1Q9NRD9 1551 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 A0A1B0GUL6 1792 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
SMG8-201ENST00000300917 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
SMG8-201ENST00000300917 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
SMG8-201ENST00000300917 CNTNAP5Q8WYK1 1306 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 PPP6R2O75170 966 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 CCDC144BQ3MJ40 725 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 CSRNP2Q9H175 543 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
SMG8-201ENST00000300917 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 RAD21O60216 631 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 FGRP09769 529 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 CACNB3P54284 484 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 SBK1Q52WX2 424 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 EPSTI1Q96J88 318 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 LY75O60449 1722 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 TIAM2Q8IVF5 1701 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 ZNF500O60304 480 aaPredicted RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 SMC2O95347 1197 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 CUTAO60888 179 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 MCM7P33993 719 aa16.72■□□□□ 0.27
SMG8-201ENST00000300917 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
SMG8-201ENST00000300917 DDAH1O94760 285 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CALM1P0DP23 149 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CALM2P0DP24 149 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CALM3P0DP25 149 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CDC25AP30304 524 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 AFMP43652 599 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CDK8P49336 464 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 PDE4CQ08493 712 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 HEATR3Q7Z4Q2 680 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 DHX58Q96C10 678 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 EYA3Q99504 573 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 PHF20Q9BVI0 1012 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 FLT1P17948 1338 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 OFD1O75665 1012 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 RASA1P20936 1047 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 USP17L2Q6R6M4 530 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
SMG8-201ENST00000300917 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 SRGNP10124 158 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 SCG2P13521 617 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 CHRNA5P30532 468 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.26
SMG8-201ENST00000300917 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 MTA3Q9BTC8 594 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.26
SMG8-201ENST00000300917 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.26
SMG8-201ENST00000300917 IL1R1P14778 569 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms