RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 GNAT2P19087 354 aa12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 TTC41PQ6P2S7 1318 aa12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 RPS6KA2Q15349 733 aa12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 TRMT10CQ7L0Y3 403 aaKnown RBP12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 SBNO2Q9Y2G9 1366 aa12.96□□□□□ -0.34
SHROOM3-201ENST00000296043 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CHGBP05060 677 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 ORC6Q9Y5N6 252 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 DDIT3P35638 169 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 LMNB2Q03252 620 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CCDC138Q96M89 665 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 NCOA2Q15596 1464 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 ETF1P62495 437 aaKnown RBP12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 MMEL1Q495T6 779 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 ZNF229Q9UJW7 825 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 USTQ9Y2C2 406 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CALM1P0DP23 149 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CALM2P0DP24 149 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CALM3P0DP25 149 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 MAGEA1P43355 309 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 PAK1Q13153 545 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 RINLQ6ZS11 566 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SYCE1Q8N0S2 351 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SUPT3HO75486 399 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 KRT3P12035 628 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SLC5A1P13866 664 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 DAB2P98082 770 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 NRBF2Q96F24 287 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 FAM173BQ6P4H8 233 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 PNOCQ13519 176 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 SH2D4AQ9H788 454 aa12.95□□□□□ -0.34
SHROOM3-201ENST00000296043 RXRAP19793 462 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 PTPRCP08575 1304 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 ZNF174Q15697 407 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 SNRNP27Q8WVK2 155 aaKnown RBP12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 EPS15L1Q9UBC2 864 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 EPB41P11171 864 aaKnown RBP12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CASP2P42575 452 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CUL3Q13618 768 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 PSMD7P51665 324 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 SNX1Q13596 522 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CSGALNACT2Q8N6G5 542 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 NAPAP54920 295 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 PRAM1Q96QH2 718 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CUL4BQ13620 913 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 FBXW10Q5XX13 1052 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 KRT75O95678 551 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 CEP19Q96LK0 163 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 ZBTB10Q96DT7 871 aa12.94□□□□□ -0.34
SHROOM3-201ENST00000296043 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 COQ7Q99807 217 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 GIPC1O14908 333 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 MCF2P10911 925 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 NR1D1P20393 614 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 IL9RQ01113 521 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 PARD6BQ9BYG5 372 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 AATFQ9NY61 560 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 HIPK4Q8NE63 616 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 CFTRP13569 1480 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 MAML1Q92585 1016 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 TOM1L2Q6ZVM7 507 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 CCHCR1Q8TD31 782 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 LGSNQ5TDP6 509 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 KIF21AQ7Z4S6 1674 aa12.93□□□□□ -0.34
SHROOM3-201ENST00000296043 BUB1O43683 1085 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms