RNA–Protein interactions for RNA: ENST00000287497.12

ITGAM-201, Transcript of integrin subunit alpha M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAM, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-201ENST00000287497 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 ATP2B4P23634 1241 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 MCM7P33993 719 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 BBOX1O75936 387 aa13.45□□□□□ -0.26
ITGAM-201ENST00000287497 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 TM4SF1P30408 202 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 GSTO1P78417 241 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 LONRF3Q496Y0 759 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 USP17L2Q6R6M4 530 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 PIK3AP1Q6ZUJ8 805 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
ITGAM-201ENST00000287497 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
ITGAM-201ENST00000287497 PCDHB6Q9Y5E3 794 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 TAF1P21675 1872 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 TCP10L2B9ZVM9 353 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
ITGAM-201ENST00000287497 SLC27A3Q5K4L6 730 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
ITGAM-201ENST00000287497 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
ITGAM-201ENST00000287497 ZNF384Q8TF68 577 aa13.44□□□□□ -0.26
ITGAM-201ENST00000287497 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PNMA1Q8ND90 353 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 EYA3Q99504 573 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
ITGAM-201ENST00000287497 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 DYNC1I1O14576 645 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PDE6BP35913 854 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PRKG1Q13976 671 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 RIOK1Q9BRS2 568 aaKnown RBP13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 ZSWIM4Q9H7M6 989 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 SERTAD1Q9UHV2 236 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PCDHA5Q9Y5H7 936 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 SLC16A2P36021 539 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 SNAP25P60880 206 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
ITGAM-201ENST00000287497 PKD1L3Q7Z443 1732 aa13.43□□□□□ -0.26
ITGAM-201ENST00000287497 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 SPICE1Q8N0Z3 855 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 FANCLQ9NW38 375 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 GDF11O95390 407 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 YEATS4O95619 227 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 ERCC3P19447 782 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 HOOK1Q9UJC3 728 aaKnown RBP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 VEGFAP15692 232 aaPredicted RBP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 FANCCQ00597 558 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 SYT10Q6XYQ8 523 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 WASF1Q92558 559 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
ITGAM-201ENST00000287497 BLZF1Q9H2G9 400 aa13.42□□□□□ -0.26
ITGAM-201ENST00000287497 ADRA2BP18089 450 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 ALDH1B1P30837 517 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 BAG6P46379 1132 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 NOM1Q5C9Z4 860 aaKnown RBP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 TDRD3Q9H7E2 651 aaKnown RBP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 IQCB1Q15051 598 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SHC4Q6S5L8 630 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 DHX40Q8IX18 779 aaKnown RBP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SMARCE1Q969G3 411 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 COL16A1Q07092 1604 aaPredicted RBP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 ITGB4P16144 1822 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
ITGAM-201ENST00000287497 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
ITGAM-201ENST00000287497 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
ITGAM-201ENST00000287497 CCDC194A0A1B0GVG4 234 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 BRIP1Q9BX63 1249 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 NAPAP54920 295 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 NFIAQ12857 509 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
ITGAM-201ENST00000287497 TRIM75PA6NK02 468 aa13.4□□□□□ -0.27
ITGAM-201ENST00000287497 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.27
ITGAM-201ENST00000287497 NPR1P16066 1061 aa13.4□□□□□ -0.27
ITGAM-201ENST00000287497 STAG1Q8WVM7 1258 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms