RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 SLC44A5Q8NCS7 719 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 DPF2Q92785 391 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 NAT10Q9H0A0 1025 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 PDIA3P30101 505 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 MCM4P33991 863 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 ADCY7P51828 1080 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 GPC2Q8N158 579 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 SH2B2O14492 632 aaPredicted RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 OSBPP22059 807 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 PRMT6Q96LA8 375 aaPredicted RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 ORC4O43929 436 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 F13A1P00488 732 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SYT1P21579 422 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 USH1GQ495M9 461 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 ERMNQ8TAM6 284 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 TNPO1Q92973 898 aaKnown RBP9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 DEFB129Q9H1M3 183 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SAMM50Q9Y512 469 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 EPHX2P34913 555 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 MRPL11Q9Y3B7 192 aaKnown RBP9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 MYCNP04198 464 aaPredicted RBP9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SEPT2Q15019 361 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 NEDD1Q8NHV4 660 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 ZHX2Q9Y6X8 837 aa9.47□□□□□ -0.89
GTF3C3-201ENST00000263956 SALL3Q9BXA9 1300 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 CHGBP05060 677 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 CHMP4BP1P59074 171 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 STIM1Q13586 685 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 DIS3L2Q8IYB7 885 aaKnown RBP9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 PYM1Q9BRP8 204 aaKnown RBP9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 RIC1Q4ADV7 1423 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 WTIPA6NIX2 430 aaPredicted RBP9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 CFBP00751 764 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 ALAS1P13196 640 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 MCTP2Q6DN12 878 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 KRT25Q7Z3Z0 450 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 FAM160B2Q86V87 743 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.46□□□□□ -0.89
GTF3C3-201ENST00000263956 CACNA1FO60840 1977 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 KLRG2A4D1S0 409 aaPredicted RBP9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 JAK2O60674 1132 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 SMC2O95347 1197 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 TPM3P06753 285 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 VIL1P09327 827 aaKnown RBP9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 KRT40Q6A162 431 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
GTF3C3-201ENST00000263956 CCNA1P78396 465 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 JAKMIP3Q5VZ66 844 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 RTFDC1Q9BY42 306 aaPredicted RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 NUP62CLQ9H1M0 184 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 NEDD4P46934 1319 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 SCG2P13521 617 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 NONOQ15233 471 aaKnown RBP eCLIP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 RILPL1Q5EBL4 403 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 CMTR1Q8N1G2 835 aaKnown RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 FSIP1Q8NA03 581 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 FAM163AQ96GL9 167 aaPredicted RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 AMNQ9BXJ7 453 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 SLC5A4Q9NY91 659 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 KIF22Q14807 665 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 MCF2L2Q86YR7 1114 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 VPS54Q9P1Q0 977 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 AKR1B1P15121 316 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 STAT2P52630 851 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 SPP2Q13103 211 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 LETM2Q2VYF4 491 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 ATL3Q6DD88 541 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 CEP95Q96GE4 821 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms