RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 PROM2Q8N271 834 aa15.43■□□□□ 0.06
TNFRSF8-201ENST00000263932 ZFP91Q96JP5 570 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF8-201ENST00000263932 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
TNFRSF8-201ENST00000263932 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
TNFRSF8-201ENST00000263932 FAM217BQ9NTX9 383 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF8-201ENST00000263932 VEGFAP15692 232 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 ATP2B4P23634 1241 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 CACTINQ8WUQ7 758 aaKnown RBP15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 KCNF1Q9H3M0 494 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 VWA3AA6NCI4 1184 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 POLR2DO15514 142 aaKnown RBP15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 STAG2Q8N3U4 1231 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 GRIN1Q05586 938 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 NLGN1Q8N2Q7 840 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 ELP1O95163 1332 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
TNFRSF8-201ENST00000263932 IFNAR1P17181 557 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 EYA3Q99504 573 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 RBM6P78332 1123 aaKnown RBP15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 STX1AQ16623 288 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 ATP8A2Q9NTI2 1148 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 ANO10Q9NW15 660 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 RTL9Q8NET4 1388 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 USP27XA6NNY8 438 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 BBOX1O75936 387 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 CASP1P29466 404 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 PTPN14Q15678 1187 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 ARPP21Q9UBL0 812 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF8-201ENST00000263932 DEFB132Q7Z7B7 95 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 MYO5AQ9Y4I1 1855 aaKnown RBP15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 FOXN1O15353 648 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 SGMS1Q86VZ5 419 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 H0YIN7 160 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 KRT2P35908 639 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 UVSSAQ2YD98 709 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 DPCR1Q3MIW9 517 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 BRIP1Q9BX63 1249 aa15.4■□□□□ 0.06
TNFRSF8-201ENST00000263932 SEMA3EO15041 775 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 KIF5BP33176 963 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 NTRK3Q16288 839 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 NAT10Q9H0A0 1025 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 KCNH3Q9ULD8 1083 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 CCDC194A0A1B0GVG4 234 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 POLRMTO00411 1230 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 ZNF75DP51815 510 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 STX17P56962 302 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 PDGFDQ9GZP0 370 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 PCDHAC2Q9Y5I4 1007 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 TUBGCP6Q96RT7 1819 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 C21orf2O43822 256 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 NRDCO43847 1150 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 MMP1P03956 469 aa15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 SRBD1Q8N5C6 995 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
TNFRSF8-201ENST00000263932 ADRA2BP18089 450 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 TDRD7Q8NHU6 1098 aaKnown RBP15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 TPM4P67936 248 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 SLC39A14Q15043 492 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 NAPAP54920 295 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 SOGA3Q5TF21 947 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 CEP135Q66GS9 1140 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 MYRIPQ8NFW9 859 aa15.38■□□□□ 0.05
TNFRSF8-201ENST00000263932 YEATS4O95619 227 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 TRMT44Q8IYL2 757 aaKnown RBP15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 JAKMIP3Q5VZ66 844 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 SERTAD1Q9UHV2 236 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 URI1O94763 535 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 SLC16A2P36021 539 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 CDK8P49336 464 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 LONRF3Q496Y0 759 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 ZNF772Q68DY9 489 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 SYT10Q6XYQ8 523 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 RNF216Q9NWF9 866 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
TNFRSF8-201ENST00000263932 COL4A1P02462 1669 aa15.36■□□□□ 0.05
TNFRSF8-201ENST00000263932 POLR3GO15318 223 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF8-201ENST00000263932 CTAGE5O15320 804 aa15.36■□□□□ 0.05
TNFRSF8-201ENST00000263932 RAD17O75943 681 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms