RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 FAM170AA1A519 330 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CALM1P0DP23 149 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CALM2P0DP24 149 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CALM3P0DP25 149 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CACTINQ8WUQ7 758 aaKnown RBP17.22■□□□□ 0.35
TIMP2-201ENST00000262768 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CCNT1O60563 726 aaKnown RBP17.22■□□□□ 0.35
TIMP2-201ENST00000262768 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
TIMP2-201ENST00000262768 SCG2P13521 617 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CHRNA5P30532 468 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 TXKP42681 527 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 SNAP25P60880 206 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
TIMP2-201ENST00000262768 TACC3Q9Y6A5 838 aa17.22■□□□□ 0.35
TIMP2-201ENST00000262768 CUTAO60888 179 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 TPM1P09493 284 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 POSTNQ15063 836 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 ZSWIM4Q9H7M6 989 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 HLA-DOAP06340 250 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 FANCCQ00597 558 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 SPICE1Q8N0Z3 855 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
TIMP2-201ENST00000262768 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
TIMP2-201ENST00000262768 PDLIM2Q96JY6 352 aa17.21■□□□□ 0.35
TIMP2-201ENST00000262768 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
TIMP2-201ENST00000262768 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 COA7Q96BR5 231 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
TIMP2-201ENST00000262768 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
TIMP2-201ENST00000262768 ALS2Q96Q42 1657 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 GYS1P13807 737 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 MYL5Q02045 173 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
TIMP2-201ENST00000262768 KARSQ15046 597 aaKnown RBP17.19■□□□□ 0.34
TIMP2-201ENST00000262768 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
TIMP2-201ENST00000262768 USH1GQ495M9 461 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 KCTD1Q719H9 257 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 CERKQ8TCT0 537 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 ALX1Q15699 326 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 GLIPR1L2Q4G1C9 344 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
TIMP2-201ENST00000262768 VPS16Q9H269 839 aa17.19■□□□□ 0.34
TIMP2-201ENST00000262768 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
TIMP2-201ENST00000262768 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 NLRP12P59046 1061 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 PDE4CQ08493 712 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
TIMP2-201ENST00000262768 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
TIMP2-201ENST00000262768 ZNF512BQ96KM6 892 aaPredicted RBP17.18■□□□□ 0.34
TIMP2-201ENST00000262768 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 H0YIN7 160 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 GDF11O95390 407 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 HS1BP3Q53T59 392 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 SMCO2A6NFE2 343 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 N4BP3O15049 544 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
TIMP2-201ENST00000262768 ZNF76P36508 570 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 CDK8P49336 464 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 ADKP55263 362 aaKnown RBP17.18■□□□□ 0.34
TIMP2-201ENST00000262768 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 DACH1Q9UI36 760 aa17.18■□□□□ 0.34
TIMP2-201ENST00000262768 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
TIMP2-201ENST00000262768 RAD17O75943 681 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 EARS2Q5JPH6 523 aaKnown RBP17.17■□□□□ 0.34
TIMP2-201ENST00000262768 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
TIMP2-201ENST00000262768 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
TIMP2-201ENST00000262768 PIGSQ96S52 555 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 TMOD2Q9NZR1 351 aa17.17■□□□□ 0.34
TIMP2-201ENST00000262768 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 TPM2P07951 284 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 TBC1D16Q8TBP0 767 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 TMEM47Q9BQJ4 181 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 TECP42680 631 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 ASIC1P78348 528 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms