RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 GTF2F1P35269 517 aaKnown RBP eCLIP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 EIF6P56537 245 aaKnown RBP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 MYSM1Q5VVJ2 828 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
FOXF1-201ENST00000262426 SHISA4Q96DD7 197 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 CDKL5O76039 1030 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 GOLGA8HP0CJ92 632 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 RHBDL3P58872 404 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 GSTO1P78417 241 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 TCP10Q12799 353 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 STK38Q15208 465 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
FOXF1-201ENST00000262426 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 LDHCP07864 332 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 TRIM29Q14134 588 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
FOXF1-201ENST00000262426 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 TROAPQ12815 778 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
FOXF1-201ENST00000262426 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
FOXF1-201ENST00000262426 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
FOXF1-201ENST00000262426 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 IFNAR1P17181 557 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 SF3B2Q13435 895 aaKnown RBP16.66■□□□□ 0.26
FOXF1-201ENST00000262426 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
FOXF1-201ENST00000262426 FLT1P17948 1338 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 AP5Z1O43299 807 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 ZNF444Q8N0Y2 327 aaPredicted RBP16.65■□□□□ 0.26
FOXF1-201ENST00000262426 COA1Q9GZY4 146 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 NUP62CLQ9H1M0 184 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
FOXF1-201ENST00000262426 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
FOXF1-201ENST00000262426 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 RCOR1Q9UKL0 485 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 ADAMTS3O15072 1205 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 NFIAQ12857 509 aa16.65■□□□□ 0.26
FOXF1-201ENST00000262426 ELP1O95163 1332 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
FOXF1-201ENST00000262426 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
FOXF1-201ENST00000262426 FSIP1Q8NA03 581 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 USP40Q9NVE5 1235 aa16.64■□□□□ 0.25
FOXF1-201ENST00000262426 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
FOXF1-201ENST00000262426 PPP4CP60510 307 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 POLR3GO15318 223 aaPredicted RBP16.63■□□□□ 0.25
FOXF1-201ENST00000262426 CDK8P49336 464 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
FOXF1-201ENST00000262426 TERF2Q15554 542 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 DUOX1Q9NRD9 1551 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 FGRP09769 529 aa16.63■□□□□ 0.25
FOXF1-201ENST00000262426 EARS2Q5JPH6 523 aaKnown RBP16.63■□□□□ 0.25
FOXF1-201ENST00000262426 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
FOXF1-201ENST00000262426 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
FOXF1-201ENST00000262426 SLX4Q8IY92 1834 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 ORC4O43929 436 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 ECE2O60344 883 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
FOXF1-201ENST00000262426 RASA1P20936 1047 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 TBC1D22AQ8WUA7 517 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
FOXF1-201ENST00000262426 SPTLC2O15270 562 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 TNNT1P13805 278 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 PKN1Q16512 942 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 ANO1Q5XXA6 986 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 CABP5Q9NP86 173 aa16.62■□□□□ 0.25
FOXF1-201ENST00000262426 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
FOXF1-201ENST00000262426 NDUFA8P51970 172 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
FOXF1-201ENST00000262426 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
FOXF1-201ENST00000262426 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 RAD21O60216 631 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
FOXF1-201ENST00000262426 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms