RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 AHCYL1O43865 530 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 PDE3BQ13370 1112 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 SMARCE1Q969G3 411 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 ZNHIT6Q9NWK9 470 aaKnown RBP12.15□□□□□ -0.46
GCM1-201ENST00000259803 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 COX10Q12887 443 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
GCM1-201ENST00000259803 CLIP3Q96DZ5 547 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 RNPC3Q96LT9 517 aaKnown RBP12.15□□□□□ -0.46
GCM1-201ENST00000259803 KDM1AO60341 852 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 TBX4P57082 545 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
GCM1-201ENST00000259803 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 VAMP4O75379 141 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 SLC8A3P57103 927 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 SPDYCQ5MJ68 293 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 C2orf49Q9BVC5 232 aaPredicted RBP12.14□□□□□ -0.47
GCM1-201ENST00000259803 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
GCM1-201ENST00000259803 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
GCM1-201ENST00000259803 SPTLC2O15270 562 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 TNMDQ9H2S6 317 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 CROTQ9UKG9 612 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 PRELID1Q9Y255 219 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 ABCC6O95255 1503 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 ATP8B1O43520 1251 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 FESP07332 822 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 PTPROQ16827 1216 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 FAM117BQ6P1L5 589 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 B3GALNT1O75752 331 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 CCNCP24863 283 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
GCM1-201ENST00000259803 KIF11P52732 1056 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 CTAG1AP78358 180 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
GCM1-201ENST00000259803 RGS12O14924 1447 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 MAP3K5Q99683 1374 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 MYBPC3Q14896 1274 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 OR8K1Q8NGG5 319 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 ENO4A6NNW6 628 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 M0R2C6 588 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 DMPKQ09013 629 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 CWF19L1Q69YN2 538 aaKnown RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 CCSAPQ6IQ19 270 aaPredicted RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
GCM1-201ENST00000259803 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
GCM1-201ENST00000259803 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 TTC12Q9H892 705 aaPredicted RBP12.12□□□□□ -0.47
GCM1-201ENST00000259803 DLG5Q8TDM6 1919 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 CHUKO15111 745 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 ERLIN2O94905 339 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
GCM1-201ENST00000259803 MUM1Q2TAK8 710 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 CFAP58Q5T655 872 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 CTNNBL1Q8WYA6 563 aaPredicted RBP12.11□□□□□ -0.47
GCM1-201ENST00000259803 PARD6BQ9BYG5 372 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
GCM1-201ENST00000259803 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
GCM1-201ENST00000259803 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms