RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 GPC2Q8N158 579 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 USP40Q9NVE5 1235 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
CLUHP3-201ENST00000254109 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 ZNF500O60304 480 aaPredicted RBP13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 CACNB3P54284 484 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 ESR2Q92731 530 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 NID2Q14112 1375 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 SPTLC2O15270 562 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 USP5P45974 858 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 EVX2Q03828 476 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 KRT40Q6A162 431 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 DPF2Q92785 391 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 PHKBQ93100 1093 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
CLUHP3-201ENST00000254109 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 EPS15P42566 896 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 RCAN1P53805 252 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 NTRK3Q16288 839 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 RTN1Q16799 776 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 TBC1D10BQ4KMP7 808 aaPredicted RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 ZKSCAN3Q9BRR0 538 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 DDX4Q9NQI0 724 aaKnown RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
CLUHP3-201ENST00000254109 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 TPM3P06753 285 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 IFNAR1P17181 557 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 ZNF165P49910 485 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 NFIAQ12857 509 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 PICALMQ13492 652 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 NAP1L5Q96NT1 182 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 CYP2D6P10635 497 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 STX1AQ16623 288 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLUHP3-201ENST00000254109 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 FLT1P17948 1338 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 USP17L12C9JPN9 530 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 USP17L21D6R901 530 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 WNT10BO00744 389 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms