RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 IRS2Q9Y4H2 1338 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 ACTN4O43707 911 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 DDAH1O94760 285 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 CALM1P0DP23 149 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 CALM2P0DP24 149 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 CALM3P0DP25 149 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 SARSP49591 514 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 UBASH3AP57075 661 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 PTPN14Q15678 1187 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 NPY5RQ15761 445 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 NOM1Q5C9Z4 860 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 FAM182BQ5T319 152 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 ZNF592Q92610 1267 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 HOOK1Q9UJC3 728 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 CNTNAP5Q8WYK1 1306 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 SERPINC1P01008 464 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 SFPQP23246 707 aaKnown RBP eCLIP22.38■■□□□ 1.178e-7■□□□□ 10.5
CDC42EP1-201ENST00000249014 E4F1Q66K89 784 aaPredicted RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 SRBD1Q8N5C6 995 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 ARHGEF1Q92888 912 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 ARID3AQ99856 593 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 ATP8A2Q9NTI2 1148 aa22.38■■□□□ 1.17
CDC42EP1-201ENST00000249014 SBF2Q86WG5 1849 aa22.37■■□□□ 1.17
CDC42EP1-201ENST00000249014 TRIM75PA6NK02 468 aa22.37■■□□□ 1.17
CDC42EP1-201ENST00000249014 TNFRSF25Q93038 417 aa22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 CCNL1Q9UK58 526 aaPredicted RBP22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 RTCBQ9Y3I0 505 aaKnown RBP22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 TAF1LQ8IZX4 1826 aa22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 A0A087X0B3 334 aa22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 ZNF827Q17R98 1081 aa22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
CDC42EP1-201ENST00000249014 FMR1Q06787 632 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 MORC3Q14149 939 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 PTPN21Q16825 1174 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 CFAP100Q494V2 611 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 CCDC112Q8NEF3 446 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 UBE2Q2Q8WVN8 375 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 ANKRD7Q92527 254 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 EPSTI1Q96J88 318 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 ARPP21Q9UBL0 812 aaPredicted RBP22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 MORC2Q9Y6X9 1032 aaPredicted RBP22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 TMEM232C9JQI7 657 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 SLC4A8Q2Y0W8 1093 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 SBK1Q52WX2 424 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 SMARCE1Q969G3 411 aa22.35■■□□□ 1.17
CDC42EP1-201ENST00000249014 CBFA2T2O43439 604 aa22.34■■□□□ 1.17
CDC42EP1-201ENST00000249014 TOM1O60784 492 aa22.34■■□□□ 1.17
CDC42EP1-201ENST00000249014 INTS13Q9NVM9 706 aa22.34■■□□□ 1.17
CDC42EP1-201ENST00000249014 HSP90AA4PQ58FG1 418 aa22.33■■□□□ 1.17
CDC42EP1-201ENST00000249014 CTCFLQ8NI51 663 aaPredicted RBP22.33■■□□□ 1.17
CDC42EP1-201ENST00000249014 SPATA20Q8TB22 786 aa22.33■■□□□ 1.17
CDC42EP1-201ENST00000249014 MYO1BO43795 1136 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 USP17L8P0C7I0 530 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 VEGFAP15692 232 aaPredicted RBP22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 NCBP1Q09161 790 aaKnown RBP22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 RCSD1Q6JBY9 416 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 VSTM4Q8IW00 320 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 DHX58Q96C10 678 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 MED15Q96RN5 788 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.16
CDC42EP1-201ENST00000249014 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 ZNF174Q15697 407 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 DZIP1Q86YF9 867 aaKnown RBP22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 MLKLQ8NB16 471 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 PPP1R13BQ96KQ4 1090 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 ADAMTS3O15072 1205 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 KANK3Q6NY19 840 aa22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 TRMT44Q8IYL2 757 aaKnown RBP22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 SYMPKQ92797 1274 aaKnown RBP22.32■■□□□ 1.16
CDC42EP1-201ENST00000249014 LY75O60449 1722 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 KCNJ6P48051 423 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 DHX8Q14562 1220 aaKnown RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 GLIPR1L2Q4G1C9 344 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 TRIML1Q8N9V2 468 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 MKRN1Q9UHC7 482 aaKnown RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 NFE2L3Q9Y4A8 694 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 ZNF18P17022 549 aa22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 NAA30Q147X3 362 aaPredicted RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 ENOX1Q8TC92 643 aaKnown RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
CDC42EP1-201ENST00000249014 THSD7AQ9UPZ6 1657 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 NPHP1O15259 732 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 SCG2P13521 617 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 GOLGA8FQ08AF8 430 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 GOLGA8DPQ0D2H9 430 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 TTC38Q5R3I4 469 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 ANKIB1Q9P2G1 1089 aa22.3■■□□□ 1.16
CDC42EP1-201ENST00000249014 NFIXQ14938 502 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 GRIK5Q16478 980 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 SPTY2D1Q68D10 685 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 FERMT2Q96AC1 680 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 CCDC94Q9BW85 323 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 TMX1Q9H3N1 280 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 IL17RBQ9NRM6 502 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 ZBTB22O15209 634 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 TOP1P11387 765 aaKnown RBP22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 CASP1P29466 404 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms