RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CALM3P0DP25 149 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 IFIT1BQ5T764 474 aaKnown RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 ARMCX5Q6P1M9 558 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 DZIP1Q86YF9 867 aaKnown RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 ENAHQ8N8S7 591 aaPredicted RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 ORC4O43929 436 aa25.45■■□□□ 1.66
CCDC9-201ENST00000221922 HMGB2P26583 209 aaKnown RBP25.45■■□□□ 1.66
CCDC9-201ENST00000221922 SBK1Q52WX2 424 aa25.45■■□□□ 1.66
CCDC9-201ENST00000221922 ZNF804AQ7Z570 1209 aa25.45■■□□□ 1.66
CCDC9-201ENST00000221922 TRMT1Q9NXH9 659 aaKnown RBP25.45■■□□□ 1.66
CCDC9-201ENST00000221922 CGNQ9P2M7 1197 aaKnown RBP25.45■■□□□ 1.66
CCDC9-201ENST00000221922 ARPP21Q9UBL0 812 aaPredicted RBP25.45■■□□□ 1.66
CCDC9-201ENST00000221922 KCNJ14Q9UNX9 436 aa25.45■■□□□ 1.66
CCDC9-201ENST00000221922 TMC6Q7Z403 805 aa25.44■■□□□ 1.66
CCDC9-201ENST00000221922 HSD3B7Q9H2F3 369 aa25.44■■□□□ 1.66
CCDC9-201ENST00000221922 PRDM4Q9UKN5 801 aa25.44■■□□□ 1.66
CCDC9-201ENST00000221922 ZSCAN20P17040 1043 aaPredicted RBP25.44■■□□□ 1.66
CCDC9-201ENST00000221922 CEP131Q9UPN4 1083 aa25.44■■□□□ 1.66
CCDC9-201ENST00000221922 E4F1Q66K89 784 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 ELOA2Q8IYF1 753 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 CCDC82Q8N4S0 544 aa25.43■■□□□ 1.66
CCDC9-201ENST00000221922 KIF18AQ8NI77 898 aa25.43■■□□□ 1.66
CCDC9-201ENST00000221922 RBM17Q96I25 401 aaKnown RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 PSDA5PKW4 1024 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 DDAH1O94760 285 aa25.43■■□□□ 1.66
CCDC9-201ENST00000221922 LDHBP07195 334 aaKnown RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 NAA30Q147X3 362 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-201ENST00000221922 PKNOX2Q96KN3 472 aa25.43■■□□□ 1.66
CCDC9-201ENST00000221922 CLIC6Q96NY7 704 aa25.43■■□□□ 1.66
CCDC9-201ENST00000221922 SFPQP23246 707 aaKnown RBP eCLIP25.42■■□□□ 1.66
CCDC9-201ENST00000221922 TOB1P50616 345 aaPredicted RBP25.42■■□□□ 1.66
CCDC9-201ENST00000221922 FANCCQ00597 558 aa25.42■■□□□ 1.66
CCDC9-201ENST00000221922 SLC51AQ86UW1 340 aa25.42■■□□□ 1.66
CCDC9-201ENST00000221922 CMTR1Q8N1G2 835 aaKnown RBP25.42■■□□□ 1.66
CCDC9-201ENST00000221922 HOOK1Q9UJC3 728 aaKnown RBP25.42■■□□□ 1.66
CCDC9-201ENST00000221922 KCNH3Q9ULD8 1083 aa25.42■■□□□ 1.66
CCDC9-201ENST00000221922 PRPF3O43395 683 aaKnown RBP25.41■■□□□ 1.66
CCDC9-201ENST00000221922 TRIM37O94972 964 aa25.41■■□□□ 1.66
CCDC9-201ENST00000221922 GSTO1P78417 241 aa25.41■■□□□ 1.66
CCDC9-201ENST00000221922 GPSM2P81274 684 aa25.41■■□□□ 1.66
CCDC9-201ENST00000221922 UTP14CQ5TAP6 766 aaKnown RBP25.41■■□□□ 1.66
CCDC9-201ENST00000221922 ATP2B4P23634 1241 aa25.41■■□□□ 1.66
CCDC9-201ENST00000221922 HOXA10P31260 410 aaPredicted RBP25.41■■□□□ 1.66
CCDC9-201ENST00000221922 NOL10Q9BSC4 688 aaKnown RBP25.41■■□□□ 1.66
CCDC9-201ENST00000221922 JAG2Q9Y219 1238 aa25.41■■□□□ 1.66
CCDC9-201ENST00000221922 PTPREP23469 700 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 NT5C2P49902 561 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 KRBA2Q6ZNG9 492 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 PRDM10Q9NQV6 1147 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 ZNF215Q9UL58 517 aaPredicted RBP25.4■■□□□ 1.66
CCDC9-201ENST00000221922 MORC2Q9Y6X9 1032 aaPredicted RBP25.4■■□□□ 1.66
CCDC9-201ENST00000221922 LRRC37AA6NMS7 1700 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 BBOX1O75936 387 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 LMOD1P29536 600 aaPredicted RBP25.4■■□□□ 1.66
CCDC9-201ENST00000221922 DDR1Q08345 913 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 DMTNQ08495 405 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 ZNF579Q8NAF0 562 aaKnown RBP25.4■■□□□ 1.66
CCDC9-201ENST00000221922 CNNM3Q8NE01 707 aa25.4■■□□□ 1.66
CCDC9-201ENST00000221922 SPDYE4A6NLX3 237 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 MYO1BO43795 1136 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 PRDM1O75626 825 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 MYL5Q02045 173 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 TROAPQ12815 778 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 ERO1AQ96HE7 468 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 PPP1R13BQ96KQ4 1090 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 OGFRQ9NZT2 677 aa25.39■■□□□ 1.65
CCDC9-201ENST00000221922 FBXO2Q9UK22 296 aaPredicted RBP25.39■■□□□ 1.65
CCDC9-201ENST00000221922 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
CCDC9-201ENST00000221922 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
CCDC9-201ENST00000221922 TUBB4AP04350 444 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 FUT2Q10981 343 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 NR5A1Q13285 461 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 MKRN1Q9UHC7 482 aaKnown RBP25.38■■□□□ 1.65
CCDC9-201ENST00000221922 NRDCO43847 1150 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 UFL1O94874 794 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 ATP1A3P13637 1013 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 PDE4BQ07343 736 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 PNOCQ13519 176 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 METTL16Q86W50 562 aaKnown RBP25.38■■□□□ 1.65
CCDC9-201ENST00000221922 CRAMP1Q96RY5 1269 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 PODXL2Q9NZ53 605 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 GGA1Q9UJY5 639 aa25.38■■□□□ 1.65
CCDC9-201ENST00000221922 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 KRT2P35908 639 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 PPP4CP60510 307 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 PKN1Q16512 942 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 TXNRD1Q16881 649 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 ISM2Q6H9L7 571 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 BRMS1Q9HCU9 246 aa25.37■■□□□ 1.65
CCDC9-201ENST00000221922 SRPRBQ9Y5M8 271 aaKnown RBP25.37■■□□□ 1.65
CCDC9-201ENST00000221922 CBFA2T2O43439 604 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 IL1R1P14778 569 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 LONRF3Q496Y0 759 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 PHF20Q9BVI0 1012 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 L2HGDHQ9H9P8 463 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 LDHCP07864 332 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 CYP2D6P10635 497 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 OLFM4Q6UX06 510 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 TMTC3Q6ZXV5 915 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 CERS3Q8IU89 383 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms