RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Prl3d1P18121 224 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Plcb3P51432 1234 aaKnown RBP10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rad23aP54726 363 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 NpeppsQ11011 920 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Oxsr1Q6P9R2 527 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Fchsd1Q6PFY1 688 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pold4Q9CWP8 107 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Efhd1Q9D4J1 240 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Stk25Q9Z2W1 426 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 NfkbibQ60778 359 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Fam180aQ8BR21 173 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Hgh1Q8C3I8 393 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Xab2Q9DCD2 855 aaKnown RBP10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Plekhg1F6S200 1446 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Eef2kO08796 724 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 ByslO54825 436 aaKnown RBP10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Krt19P19001 403 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Q66JV7 365 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc14Q8K2J4 934 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Adamts13Q769J6 1426 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 ClgnP52194 611 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Bnip3lQ9Z2F7 218 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Eef1dP57776 281 aaKnown RBP10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 HhatQ8BMT9 499 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Abcc4E9Q236 1325 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 DgkiD3YWQ0 1071 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ms4a2P20490 235 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Kif1bpQ6ZPU9 617 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Vat1lQ80TB8 417 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mknk2Q8CDB0 459 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Kiaa1024Q8K3V7 917 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rbm43Q99J64 343 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 LpxnQ99N69 386 aa10.23□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Vti1aO89116 217 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gna11P21278 359 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dzip1lQ499E4 774 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Spa17Q62252 149 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gramd4Q8CB44 633 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 NapaQ9DB05 295 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mkrn1Q9QXP6 481 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Znf335A2A5K6 1337 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cdc42bpbQ7TT50 1713 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 MaeaQ4VC33 396 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Madcam1Q61826 405 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Abt1Q9QYL7 269 aaKnown RBP10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pde11aP0C1Q2 933 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Atp8a2P98200 1148 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc114Q3UX62 658 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccpg1Q640L3 753 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zfp317Q8C0Q5 607 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Sem1P60897 70 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mtss1lQ6P9S0 715 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Homer2Q9QWW1 354 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ppp1r12cQ3UMT1 782 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Klhl7Q8BUL5 586 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Kiaa1524Q8BWY9 907 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ndufab1Q9CR21 156 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc70Q9D9B0 223 aa10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mrpl12Q9DB15 201 aaKnown RBP10.22□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zbtb40Q6PCS8 1258 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Trim6Q8BGE7 488 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dclk3Q8BWQ5 790 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Fam204aQ8C6C7 236 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Irak4Q8R4K2 459 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Arl8aQ8VEH3 186 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Col1a2Q01149 1372 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zfp804bA0A0G2JGH6 1343 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mx1P09922 631 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Asap2Q7SIG6 958 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tekt2Q922G7 430 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zfp781Q0P5U5 243 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Nsun2Q1HFZ0 757 aaKnown RBP10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zbtb16Q3UQ17 673 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Znf532Q6NXK2 1036 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Shtn1Q8K2Q9 631 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccnt1Q9QWV9 724 aaKnown RBP10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Magi2Q9WVQ1 1275 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Yeats2Q3TUF7 1407 aa10.21□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Usp42B2RQC2 1324 aaKnown RBP10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tspyl1O88852 379 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tubb5P99024 444 aaKnown RBP10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 PsdQ5DTT2 1024 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Islr2Q5RKR3 745 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ankfy1Q810B6 1169 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ppme1Q8BVQ5 386 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ccdc186Q8C9S4 917 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Krt222Q8CCX5 294 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 ParnQ8VDG3 624 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Proca1B0QZF7 307 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Rasal2E9PW37 1286 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cdr2P97817 455 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Trim56Q80VI1 734 aaKnown RBP10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Sar1bQ9CQC9 198 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Dydc2Q9D3X8 139 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ubn2Q80WC1 1314 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 CltaO08585 235 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 1700013D24RikQ0P521 120 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ccdc174Q3U155 467 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Drc1Q3USS3 753 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 ThrspQ62264 150 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms