RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Ppp1r12bQ8BG95 976 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Pih1h3bQ8C6P5 218 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Uhrf1bp1B2KF50 1429 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Slc4a4O88343 1079 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 LdhaP06151 332 aaKnown RBP6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Becn2P0DM65 447 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Trim27Q62158 513 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ccdc65Q8VHI7 493 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Utp11Q9CZJ1 253 aaKnown RBP6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Actn2Q9JI91 894 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Mroh7A2AVR2 1279 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Pdzd8B9EJ80 1147 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Man1a2P39098 641 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Mmp14P53690 582 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Strip1Q8C079 837 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ccdc113Q8C5T8 377 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Lzts2Q91YU6 671 aa6.32□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tbc1d8bA3KGB4 1114 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Axin1O35625 863 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Prim1P20664 417 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Nek1P51954 1203 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 PhbP67778 272 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Nfe2l2Q60795 597 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 WdpcpQ8C456 722 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Mast3Q3U214 1321 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tbc1d4Q8BYJ6 1307 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tlk2O55047 718 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Stmn3O70166 180 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Prl3d1P18121 224 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Igf2bp2Q5SF07 592 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Trim56Q80VI1 734 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Zkscan8Q8BSL0 588 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tlk1Q8C0V0 766 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Cfap36Q8C6E0 343 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Parp10Q8CIE4 960 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Mtrf1Q8K126 446 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Zbtb3Q91X45 518 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Trim12aQ99PQ1 284 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Trmt44Q9D2Q2 713 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ppp1r12aQ9DBR7 1029 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Pdcd6ipQ9WU78 869 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Uchl5Q9WUP7 329 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Rad50P70388 1312 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gm15262A0A140LIQ5 728 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Svs3aF2Z472 265 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Hoxc8P09025 242 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Csrnp1P59054 583 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gabpb1Q00420 383 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Rnf40Q3U319 1001 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gpr162Q3UN16 588 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Skida1Q80YR3 822 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Sh3kbp1Q8R550 709 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Adarb2Q9JI20 745 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Rcan3Q9JKK0 239 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Cd2apQ9JLQ0 637 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Rbm6S4R1W5 1118 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ttc41Q692V3 1318 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Kifc2O08672 792 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Mmp8O70138 465 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tm6sf1P58749 370 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 S100a5P63084 93 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Chl1P70232 1209 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gm1604bQ3TRG0 118 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Krt72Q6IME9 520 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ap1s3Q7TN05 154 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Krr1Q8BGA5 380 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Usp37Q8C0R0 979 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 P3h4Q8K2B0 443 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Znf131Q8K3J5 619 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 NonoQ99K48 473 aaKnown RBP6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 WtapQ9ER69 396 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Flt1P35969 1333 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Znf541Q0GGX2 1363 aa6.31□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Prkg1P0C605 671 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 FosbP13346 338 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Micall2Q3TN34 1009 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Tbc1d2bQ3U0J8 965 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Ube2oQ6ZPJ3 1288 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 CenpuQ8C4M7 410 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 DnmbpQ6TXD4 1580 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gm21083A0A0G2JFD5 256 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Eddm13E9Q7F5 164 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Gm10354K7N6A0 256 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 GckP52792 465 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 P4ha1Q60715 534 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Lamc2Q61092 1191 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Samm50Q8BGH2 469 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Klhl31Q8BWA5 634 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Eno4Q8C042 619 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Zbtb43Q9DAI4 467 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Atp8b3Q6UQ17 1335 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Phldb3E9QAF4 648 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 TxlngQ8BHN1 524 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Nop56Q9D6Z1 580 aaKnown RBP6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Qser1A2BIE1 1698 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Lekr1B2RVN1 116 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Zkscan7E9PVW1 718 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Usp5P56399 858 aaKnown RBP6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Lig3P97386 1015 aa6.3□□□□□ -1.4
Pcdh9-202ENSMUST00000192221 Serpinb1cQ5SV42 375 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms