RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Zfp341Q6PGC9 846 aa23.28■■□□□ 1.32
Lig3-209ENSMUST00000173009 Sv2cQ69ZS6 727 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ppp1r9bQ6R891 817 aaKnown RBP23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ccdc47Q9D024 483 aaKnown RBP23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 EhhadhQ9DBM2 718 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Rasa3Q60790 834 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ppp1r10Q80W00 888 aaKnown RBP23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Lca5lQ8C0X0 741 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Fam83aQ8K2P2 436 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Usp31E9Q6Y8 1344 aa23.27■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ces1hD3Z298 562 aa23.26■■□□□ 1.31
Lig3-209ENSMUST00000173009 Vwa3bJ9JI28 736 aa23.26■■□□□ 1.31
Lig3-209ENSMUST00000173009 Syt1P46096 421 aa23.26■■□□□ 1.31
Lig3-209ENSMUST00000173009 1700013D24RikQ0P521 120 aa23.26■■□□□ 1.31
Lig3-209ENSMUST00000173009 Tm4sf4Q91XD3 202 aa23.26■■□□□ 1.31
Lig3-209ENSMUST00000173009 Arrdc4A0A0B4J1F4 415 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 Cbx2P30658 519 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 Traf3ip1Q149C2 625 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 Arhgef6Q8K4I3 771 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 Cdca7Q9D0M2 382 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 TicrrQ8BQ33 1889 aa23.25■■□□□ 1.31
Lig3-209ENSMUST00000173009 Gm44503E9PYU5 387 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Oog1E9Q5G7 496 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Magea8O89012 320 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Stat1P42225 749 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Otud5Q3U2S4 566 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Fsd1Q7TPM6 496 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Cog5Q8C0L8 829 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Dnaaf4Q8R368 420 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Kdm4cQ8VCD7 1054 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 HunkO88866 714 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Tmtc2Q56A06 836 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ces3aQ63880 571 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Slc4a7Q8BTY2 1034 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Tpcn2Q8BWC0 731 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Il31raQ8K5B1 716 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Gimap7Q8R379 293 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ces3bQ8VCU1 571 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Tubb6Q922F4 447 aa23.24■■□□□ 1.31
Lig3-209ENSMUST00000173009 Cfap99A0A140LIX9 648 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Metap2O08663 478 aaKnown RBP23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Copb2O55029 905 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Serpinb2P12388 415 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ctdnep1Q3TP92 244 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Filip1lQ6P6L0 1131 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Bola3Q8CEI1 110 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Vmn1r199Q8R280 367 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ero1bQ8R2E9 467 aa23.23■■□□□ 1.31
Lig3-209ENSMUST00000173009 Naaladl2A0A0N4SUJ3 795 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Fgfr2P21803 821 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Sap30bpQ02614 308 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 OsbpQ3B7Z2 805 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 1700123L14RikQ3V2K7 440 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Slain1Q68FF7 579 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Haus6Q6NV99 933 aaKnown RBP23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 VmacQ8BP01 174 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Rufy2Q8R4C2 606 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Rfc4Q99J62 364 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Rfx1P48377 963 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ppfia3P60469 1194 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Slc18a1Q8R090 521 aa23.22■■□□□ 1.31
Lig3-209ENSMUST00000173009 Elmsan1E9Q2I4 1089 aaKnown RBP23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Stag2O35638 1231 aa23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Swap70Q6A028 585 aaKnown RBP23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Ccp110Q7TSH4 1004 aa23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Nxf7Q80SZ6 620 aaKnown RBP23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Riox2Q8CD15 465 aa23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Tdrd1Q99MV1 1172 aa23.21■■□□□ 1.31
Lig3-209ENSMUST00000173009 Mms22lB1AUR6 1238 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Arl14Q3SXC5 192 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Sh2d1b2Q45HK4 132 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Adgrg6Q6F3F9 1165 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Alg3Q8K2A8 438 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Dppa3Q8QZY3 150 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Defb15Q8R2I5 79 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Iffo2Q8R2V2 512 aa23.2■■□□□ 1.3
Lig3-209ENSMUST00000173009 Calm1P0DP26 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Calm2P0DP27 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Calm3P0DP28 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 ChgaP26339 463 aaKnown RBP23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Atoh1P48985 351 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Kctd1Q5M956 257 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ms4a5Q810P8 197 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Mdh1bQ5F204 500 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Lrrc24Q8BHA1 521 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Pxylp1Q8BHA9 480 aa23.19■■□□□ 1.3
Lig3-209ENSMUST00000173009 Thsd7bQ6P4U0 1607 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Gm30191A0A0U1RNT7 187 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Tfcp2l1Q3UNW5 479 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ttbk2Q3UVR3 1243 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Sfi1Q3UZY0 1216 aaKnown RBP23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Dcaf15Q6PFH3 600 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Dnai1Q8C0M8 701 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Tsr2Q8C8T8 191 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ccdc178Q8CDV0 866 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Usp33Q8R5K2 909 aa23.18■■□□□ 1.3
Lig3-209ENSMUST00000173009 Usp17ldG5E8G2 545 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Usp17lcG5E8I7 545 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 LdhaP06151 332 aaKnown RBP23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Atp6v1dP57746 247 aa23.17■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms