RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Lztfl1Q9JHQ5 299 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Copb1Q9JIF7 953 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Myo1cQ9WTI7 1063 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pdcd6ipQ9WU78 869 aaKnown RBP9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Col15a1O35206 1367 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Bpifb4A2BGH0 617 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Slc4a1P04919 929 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 PpardP35396 440 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Igsf3Q6ZQA6 1194 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 EcsitQ9QZH6 435 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pramel3A2AHA7 463 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Gm7903A2AWL1 463 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 AV320801A2AWL3 467 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Gm15023L7MUB4 467 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pla2g4bP0C871 782 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 H2afxP27661 143 aaKnown RBP9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Opa1P58281 960 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 DSCC1Q14AI0 399 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cfap100Q80VN0 613 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Ddx10Q80Y44 875 aaKnown RBP9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Calml4Q91WQ9 153 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pold4Q9CWP8 107 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Fam217aQ9D9W6 419 aa9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Chd4Q6PDQ2 1915 aaKnown RBP9.4□□□□□ -0.9
Bdnf-210ENSMUST00000111051 A0A1W2P7S8 802 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 4932429P05RikA2ADI4 785 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Casp1P29452 402 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Sept1P42209 366 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Nek1P51954 1203 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Usp5P56399 858 aaKnown RBP9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Kcnd1Q03719 651 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Trappc10Q3TLI0 1259 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cyp7b1Q60991 507 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cdc5lQ6A068 802 aaKnown RBP9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Krit1Q6S5J6 736 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cc2d1bQ8BRN9 848 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Slc14a2Q8R4T9 930 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Kcnq5Q9JK45 933 aa9.4□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Slit3Q9WVB4 1523 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Kcng1A2BDX4 514 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ankrd35E9Q9D8 996 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Casp12O08736 419 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gna11P21278 359 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Zfp781Q0P5U5 243 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ddx17Q501J6 650 aaKnown RBP9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Trim6Q8BGE7 488 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Caps2Q8BUG5 550 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Filip1Q9CS72 1211 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mfap3lQ9D3X9 409 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Hic2Q9JLZ6 619 aaKnown RBP9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Letm1Q9Z2I0 738 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Homer1Q9Z2Y3 366 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Pik3c2bE9QAN8 1632 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Lcmt1A0A0U1RNF2 332 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Akr1c19G3X9Y6 323 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 IntuQ059U7 942 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gpbp1Q6NXH3 473 aaKnown RBP9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Haus2Q9CQS9 234 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ltb4r2Q9JJL9 360 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mroh6V9GX81 722 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gm11983V9GXS8 105 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mcm7Q61881 719 aaKnown RBP9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Nme8Q715T0 586 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Hook2Q7TMK6 716 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Als2cr12Q8BVM7 383 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Matr3Q8K310 846 aaKnown RBP9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gimap7Q8R379 293 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ccne2Q9Z238 404 aa9.39□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gm28510A0A087WP28 240 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Rtel1Q0VGM9 1203 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 C87499Q3UX49 493 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ccdc14Q8K2J4 934 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tnrc6bQ8BKI2 1810 aaKnown RBP9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cyp3a25O09158 503 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tnnc1P19123 161 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cct5P80316 541 aaKnown RBP9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 CtcfQ61164 736 aaKnown RBP9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Olfr118Q7TRJ6 321 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Epn1Q80VP1 575 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Map10Q8BJS7 891 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Arfgap2Q99K28 520 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 GdaQ9R111 454 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Clip2Q9Z0H8 1047 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Col16a1Q8BLX7 1580 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cnbd1B1AWM0 430 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Zfpm1O35615 995 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Enc1O35709 589 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Senp1P59110 640 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Fam107bQ3TGF2 131 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cct6bQ61390 531 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Q66JV7 365 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tcp11l2Q8K1H7 517 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tc2nQ91XT6 489 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 CutaQ9CQ89 177 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Fam84aQ9D650 292 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Psma7Q9Z2U0 248 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 PplQ9R269 1755 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ptpn23Q6PB44 1692 aa9.38□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gm5580A0A0N4SVP8 411 aa9.37□□□□□ -0.91
Bdnf-210ENSMUST00000111051 A0A1W2P6Q8 802 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms