RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Rasgrp4Q8BTM9 673 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Nfxl1E9Q8I7 918 aaKnown RBP15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Atp2b1G5E829 1220 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Dnajb6O54946 365 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Cyp2d9P11714 504 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Alppl2P24823 529 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ddx10Q80Y44 875 aaKnown RBP15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ciapin1Q8WTY4 309 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gpr108Q91WD0 569 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Spata31d1bE9QA57 1361 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Zscan25B2RX31 543 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Bbs9Q811G0 885 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Sorbs3Q9R1Z8 733 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Map2P20357 1828 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 LrmpQ60664 539 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Rhpn1Q61085 643 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pcdhb15Q91Y04 786 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Cabp5Q9JLK3 173 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Riox2Q8CD15 465 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Epb41l3Q9WV92 929 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ptpn23Q6PB44 1692 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Lzts2Q91YU6 671 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Tubgcp2Q921G8 905 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 EhhadhQ9DBM2 718 aa15.12■□□□□ 0.01
Clcn3-204ENSMUST00000110301 A0A1W2P6Q8 802 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm9048A0A1W2P7H4 802 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 A0A1W2P7Z8 802 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm9046A0A1W2P855 802 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Casp12O08736 419 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Q8BZJ8 459 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pde5aQ8CG03 865 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Glt1d1A4FUP9 346 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pde4aO89084 844 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 SnrkQ8VDU5 748 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Slit2Q9R1B9 1521 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm4758L7N258 96 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Rtkn2Q14B46 604 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Secisbp2lQ6A098 1086 aaKnown RBP15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Slc44a4Q91VA1 707 aa15.11■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm38392E9Q2A2 434 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Abcf1Q6P542 837 aaKnown RBP15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Cc2d1bQ8BRN9 848 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Calml3Q9D6P8 149 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Myo3bQ1EG27 1305 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 NcapgE9PWG6 1004 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Mtss1lQ6P9S0 715 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Jade2Q6ZQF7 829 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Haus2Q9CQS9 234 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm5624F6ZZG8 207 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Mknk2Q8CDB0 459 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Phldb2Q8K1N2 1249 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Usp33Q8R5K2 909 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Themis2Q91YX0 663 aa15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ssr1Q9CY50 286 aaKnown RBP15.1■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gm43638A0A0J9YU36 694 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Cpb1B2RS76 415 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 CrkQ64010 304 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Csrnp2Q8BGQ2 534 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pdzph1Q8BGR1 1238 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Zbtb39Q6PDK0 712 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Sestd1Q80UK0 696 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Kiaa1524Q8BWY9 907 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Tmem47Q9JJG6 181 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Mon2Q80TL7 1715 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Epb41l2O70318 988 aaKnown RBP15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Eef2P58252 858 aaKnown RBP15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Spata5Q3UMC0 893 aaKnown RBP15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 PrimpolQ6P1E7 537 aa15.09■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Jakmip2D3YXK0 820 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 CebpaP53566 359 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Nucb2P81117 420 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ccdc102aQ3TMW1 549 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Tmed8Q3UHI4 326 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Arhgef2Q60875 985 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Matr3Q8K310 846 aaKnown RBP15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Tmx1Q8VBT0 278 aa15.08■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Snap25P60879 206 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Plekhf1Q3TB82 279 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Q3TYL0 343 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Tas2r124Q7M718 309 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Ttll1Q91V51 423 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Nlrp5Q9R1M5 1163 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Lgr5Q9Z1P4 907 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Gm3893E9Q1I1 302 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 WaplQ65Z40 1200 aaKnown RBP15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 IarsQ8BU30 1262 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Ndufv1Q91YT0 464 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Tmem191cQ9JJB1 302 aa15.08■□□□□ 0
Clcn3-204ENSMUST00000110301 Prss51A0A286YDY8 319 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 GmnnO88513 206 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Scg2Q03517 617 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Mcm7Q61881 719 aaKnown RBP15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Cep128Q8BI22 1102 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 GlmnQ8BZM1 596 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Ddx27Q921N6 760 aaKnown RBP15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Akap8Q9DBR0 687 aaKnown RBP15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Nr2e3Q9QXZ7 395 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Nfe2l3Q9WTM4 660 aa15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Pafah1b1P63005 410 aaKnown RBP15.07■□□□□ 0
Clcn3-204ENSMUST00000110301 Cabp7Q91ZM8 215 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms