RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Spata16Q8C636 571 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Znf830Q8R1N0 363 aaKnown RBP11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Rabep2Q91WG2 554 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 PzpQ61838 1495 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Gm30191A0A0U1RNT7 187 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 AU022751B1B0V2 589 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 PparaP23204 468 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Arhgef2Q60875 985 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Nrbf2Q8VCQ3 287 aa11.67□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Gm6657A0A1B0GRJ3 277 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Kif6E9PX57 802 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Hspa8P63017 646 aaKnown RBP11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Sept8Q8CHH9 429 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Gm4758L7N258 96 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Tsr1Q5SWD9 803 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Wdr3Q8BHB4 942 aaKnown RBP11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Lrrd1Q8C0R9 853 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Krt222Q8CCX5 294 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 AlkP97793 1621 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Bpifb4A2BGH0 617 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Mybl2P48972 704 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 NelfbQ8C4Y3 580 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Sar1bQ9CQC9 198 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Naa16Q9DBB4 864 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Elf1Q60775 612 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Jarid2Q62315 1234 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Ppp1r14cQ8R4S0 164 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Usp54Q8BL06 1588 aaKnown RBP11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 EsrrgP62509 458 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Eya1P97767 591 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Rlbp1Q9Z275 317 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Gngt1Q61012 74 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Sestd1Q80UK0 696 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Uhrf1bp1lA2RSJ4 1457 aa11.66□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Zscan25B2RX31 543 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Erich2E9Q1A6 463 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Daam1Q8BPM0 1077 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Mphosph6Q9D1Q1 161 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Col17a1Q07563 1470 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Plcb3P51432 1234 aaKnown RBP11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Prdm1Q60636 856 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 FibpQ9JI19 357 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Myh11O08638 1972 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 RcvrnP34057 202 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Rad17Q6NXW6 688 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Rab3gap1Q80UJ7 981 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Nucks1Q80XU3 234 aaKnown RBP11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Rassf10Q8BL43 508 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Sept10Q8C650 452 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Ttc27Q8CD92 847 aa11.65□□□□□ -0.54
Col6a3-202ENSMUST00000097653 Eya2O08575 532 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Zc3h18Q0P678 948 aaKnown RBP11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Mybpc2Q5XKE0 1136 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Plch2A2AP18 1501 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Taf4E9QAP7 1042 aaKnown RBP11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ppp2r5eQ61151 467 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Retreg2Q6NS82 541 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Lrrc8aQ80WG5 810 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Tekt2Q922G7 430 aa11.65□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Map3k19E9Q3S4 1311 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 1700018F24RikB2RW27 314 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Zbtb45Q52KG4 520 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Itga6Q61739 1091 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Msl1Q6PDM1 616 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Nacc1Q7TSZ8 514 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Hgh1Q8C3I8 393 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ddx41Q91VN6 622 aaKnown RBP11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Bag2Q91YN9 210 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Azi2Q9QYP6 405 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Kif20bQ80WE4 1774 aaKnown RBP11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ubn2Q80WC1 1314 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Chd4Q6PDQ2 1915 aaKnown RBP11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Zfp781Q0P5U5 243 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Aifm3Q3TY86 605 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Daam2Q80U19 1115 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Cetn3O35648 167 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Cct5P80316 541 aaKnown RBP11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Arhgap30Q640N3 1101 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Cnnm4Q69ZF7 771 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 ScocQ78YZ6 125 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Nudcd3Q8R1N4 363 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Hoxc9P09633 260 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Rab34Q64008 259 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ankfy1Q810B6 1169 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Cabs1Q8C633 391 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Pacsin2Q9WVE8 486 aaKnown RBP11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Spata2Q8K004 515 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 ErmnQ5EBJ4 281 aa11.64□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Gm28043E0CXC2 719 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Gpbp1Q6NXH3 473 aaKnown RBP11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ttc1Q91Z38 292 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 St13Q99L47 371 aaKnown RBP11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Cops6O88545 324 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ano9P86044 747 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Tpd52Q62393 224 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Zkscan8Q8BSL0 588 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Trim16Q99PP9 556 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Polr3cQ9D483 533 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Tpcn1Q9EQJ0 817 aa11.63□□□□□ -0.55
Col6a3-202ENSMUST00000097653 Ctnna3Q65CL1 895 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms