RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Sirt2Q8VDQ8 389 aa30.84■■■□□ 2.53
Shf-201ENSMUST00000048635 Chmp4cQ9D7F7 232 aa30.84■■■□□ 2.53
Shf-201ENSMUST00000048635 Eid1Q9DCR4 169 aa30.84■■■□□ 2.53
Shf-201ENSMUST00000048635 MycnP03966 462 aaKnown RBP30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 LdhaP06151 332 aaKnown RBP30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 Tshz1Q5DTH5 1084 aa30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 Tut1Q8R3F9 869 aa30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 Wdr19Q3UGF1 1341 aa30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 SynrgQ5SV85 1306 aa30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 Brca1P48754 1812 aa30.83■■■□□ 2.53
Shf-201ENSMUST00000048635 Ces1hD3Z298 562 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Prkg1P0C605 671 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Usp50Q6P8X6 390 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Kif1bpQ6ZPU9 617 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Lca5Q80ST9 704 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Kiaa1524Q8BWY9 907 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Clstn1Q9EPL2 979 aa30.82■■■□□ 2.52
Shf-201ENSMUST00000048635 Elmsan1E9Q2I4 1089 aaKnown RBP30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 A430078G23RikE9Q7Y4 484 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Terf2O35144 541 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Slain1Q68FF7 579 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Riox2Q8CD15 465 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Ipo9Q91YE6 1041 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Has3O08650 554 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Irx3P81067 507 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Cdkl5Q3UTQ8 938 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 Tdrd1Q99MV1 1172 aa30.81■■■□□ 2.52
Shf-201ENSMUST00000048635 GnaqP21279 359 aa30.8■■■□□ 2.52
Shf-201ENSMUST00000048635 Cct2P80314 535 aaKnown RBP30.8■■■□□ 2.52
Shf-201ENSMUST00000048635 Zbtb39Q6PDK0 712 aa30.8■■■□□ 2.52
Shf-201ENSMUST00000048635 Col11a1Q61245 1804 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 Naaladl2A0A0N4SUJ3 795 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 Mmp10O55123 476 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 FanccP50652 591 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 Foxp1P58462 705 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 Sh2d1b2Q45HK4 132 aa30.79■■■□□ 2.52
Shf-201ENSMUST00000048635 Cfap99A0A140LIX9 648 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 PtpraP18052 829 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 Llgl2Q3TJ91 1027 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 Dcaf15Q6PFH3 600 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 Lzts2Q91YU6 671 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 CsadQ9DBE0 493 aa30.78■■■□□ 2.52
Shf-201ENSMUST00000048635 Rfx1P48377 963 aa30.77■■■□□ 2.52
Shf-201ENSMUST00000048635 Rbm46P86049 533 aa30.77■■■□□ 2.52
Shf-201ENSMUST00000048635 Ctdnep1Q3TP92 244 aa30.77■■■□□ 2.52
Shf-201ENSMUST00000048635 Usp14Q9JMA1 493 aaKnown RBP30.77■■■□□ 2.52
Shf-201ENSMUST00000048635 Ccdc88aQ5SNZ0 1873 aa30.76■■■□□ 2.52
Shf-201ENSMUST00000048635 Eef2kO08796 724 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Fgfr2P21803 821 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Irf5P56477 497 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Znf697Q569E7 569 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Ccp110Q7TSH4 1004 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 St18Q80TY4 1045 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Gmcl1Q920G9 524 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Celf2Q9Z0H4 508 aaKnown RBP30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Cdc45Q9Z1X9 566 aa30.76■■■□□ 2.51
Shf-201ENSMUST00000048635 Ulk4Q3V129 1303 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Gm20425E9Q035 978 aaKnown RBP30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Casq1O09165 405 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Traf1P39428 409 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 SrprbP47758 269 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Haus6Q6NV99 933 aaKnown RBP30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Zfp341Q6PGC9 846 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Ero1bQ8R2E9 467 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Mettl16Q9CQG2 553 aaKnown RBP30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Prkab1Q9R078 270 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Dock2Q8C3J5 1828 aa30.75■■■□□ 2.51
Shf-201ENSMUST00000048635 Limch1Q3UH68 1057 aa30.74■■■□□ 2.51
Shf-201ENSMUST00000048635 Tbc1d5Q80XQ2 815 aa30.74■■■□□ 2.51
Shf-201ENSMUST00000048635 Il31raQ8K5B1 716 aa30.74■■■□□ 2.51
Shf-201ENSMUST00000048635 Smc3Q9CW03 1217 aaKnown RBP30.74■■■□□ 2.51
Shf-201ENSMUST00000048635 Dicer1Q8R418 1916 aa30.74■■■□□ 2.51
Shf-201ENSMUST00000048635 Dnai2A2AC93 623 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 ChgaP26339 463 aaKnown RBP30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 RubcnQ80U62 956 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Rtn1Q8K0T0 780 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 1700013D24RikQ0P521 120 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Ddx49Q4FZF3 480 aaKnown RBP30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Stxbp3Q60770 592 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Ms4a5Q810P8 197 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Dppa3Q8QZY3 150 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 EhhadhQ9DBM2 718 aa30.73■■■□□ 2.51
Shf-201ENSMUST00000048635 Nap1l2P51860 460 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Rasa3Q60790 834 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Smarcc2Q6PDG5 1213 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Plcg2Q8CIH5 1265 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Tm4sf4Q91XD3 202 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Rfc4Q99J62 364 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Bcs1lQ9CZP5 418 aa30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Eif4enif1Q9EST3 983 aaKnown RBP30.72■■■□□ 2.51
Shf-201ENSMUST00000048635 Gm44503E9PYU5 387 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Babam1Q3UI43 333 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Gprin1Q3UNH4 932 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Eme2Q56A04 373 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Nlgn2Q69ZK9 836 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Trpv1Q704Y3 839 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Galnt17Q7TT15 598 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Nxf7Q80SZ6 620 aaKnown RBP30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Dnaaf4Q8R368 420 aa30.71■■■□□ 2.51
Shf-201ENSMUST00000048635 Lonrf3Q9D4H7 753 aa30.71■■■□□ 2.51
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms