RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Dctn1O08788 1281 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Fchsd1Q6PFY1 688 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Terb1Q8C0V1 768 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Taf6lQ8R2K4 616 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Copb1Q9JIF7 953 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Naaladl2A0A0N4SUJ3 795 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ccdc114Q3UX62 658 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tbx2Q60707 711 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Sdad1Q80UZ2 687 aaKnown RBP11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Paf1Q8K2T8 535 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Exoc1Q8R3S6 894 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Adcy3Q8VHH7 1145 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ndufb9Q9CQJ8 179 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 CpvlQ9D3S9 478 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Nfat5Q9WV30 1534 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 C3P01027 1663 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ugt1a8D3Z748 530 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ugt1a10E9PXN7 530 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Casp12O08736 419 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 ByslO54825 436 aaKnown RBP11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Cd3dP04235 173 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Chp1P61022 195 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Slc7a3P70423 618 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Traf3ip1Q149C2 625 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Epn1Q80VP1 575 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ccdc122Q8BVN0 290 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Sar1bQ9CQC9 198 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Mapk8ip1Q9WVI9 707 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Mon2Q80TL7 1715 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Shank2Q80Z38 1476 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Otud7bB2RUR8 840 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ube3aO08759 870 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Nck2O55033 380 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tcp11Q01755 566 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Fam89aQ14BJ1 175 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ppp1r21Q3TDD9 780 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Rnf40Q3U319 1001 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Slitrk3Q810B9 980 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Washc1Q8VDD8 475 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 LpxnQ99N69 386 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 NgdnQ9DB96 315 aaKnown RBP11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 C5P06684 1680 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 4932429P05RikA2ADI4 785 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Pth1rP41593 591 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gnat2P50149 354 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 1700013D24RikQ0P521 120 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Kiaa1468Q148V7 1216 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Plbd2Q3TCN2 594 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ccdc148Q6P5U8 527 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Jade2Q6ZQF7 829 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 VmacQ8BP01 174 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Fam177a1Q8BR63 207 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ddx54Q8K4L0 874 aaKnown RBP11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gpr108Q91WD0 569 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 NenfQ9CQ45 171 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 D430041D05RikF6ZGR6 1678 aa11.63□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ddx60E9PZQ1 1711 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Bicdl1A0JNT9 577 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Eva1cP58659 440 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ppp1r7Q3UM45 361 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Mdh1bQ5F204 500 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gngt1Q61012 74 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Asic3Q6X1Y6 530 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 PpanQ91YU8 470 aaKnown RBP11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tpcn1Q9EQJ0 817 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Zfp853A0A1D5RM95 733 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gm10378F6XQQ1 160 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Nid2O88322 1403 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ica1lQ3TY65 431 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 FliiQ9JJ28 1271 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Apol7aB2RT54 418 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Pip4k2aO70172 405 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Snrpa1P57784 255 aaKnown RBP11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Nek5Q7TSC3 627 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Arhgef6Q8K4I3 771 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 ParvgQ9ERD8 331 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Kcnq5Q9JK45 933 aa11.62□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ifit1bl2Q3U687 466 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tubb2aQ7TMM9 445 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Lrrc1Q80VQ1 524 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 AbraQ8BUZ1 375 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Zbtb1Q91VL9 713 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Sh2b1Q91ZM2 756 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 NsmfQ99NF2 532 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tubb2bQ9CWF2 445 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Popdc2Q9ES82 367 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Kifc2O08672 792 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Rbm12b2Q66JV4 834 aaKnown RBP11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Krit1Q6S5J6 736 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Jmjd4Q8BFT6 427 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Erlin1Q91X78 346 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Ccdc96Q9CR92 584 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Zfand4D3Z3C6 739 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Fam186bD3Z420 943 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gm5934D3Z4U6 212 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gm4340L7N2C4 268 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 MthfslL7N466 203 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Tubb4bP68372 445 aaKnown RBP11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Gjb4Q02738 266 aa11.61□□□□□ -0.55
Trim17-201ENSMUST00000047697 Asic1Q6NXK8 526 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms