RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 PrkdcP97313 4128 aa3.02□□□□□ -1.93
Usp47-202ENSMUST00000210309 Birc6O88738 4882 aa3.01□□□□□ -1.93
Usp47-202ENSMUST00000210309 SacsQ9JLC8 4582 aa3.01□□□□□ -1.93
Usp47-202ENSMUST00000210309 Abca13Q5SSE9 5034 aa3.01□□□□□ -1.93
Usp47-202ENSMUST00000210309 Rnf213E9Q555 5152 aaKnown RBP3.01□□□□□ -1.93
Usp47-202ENSMUST00000210309 Dnah17Q69Z23 4481 aa3□□□□□ -1.93
Usp47-202ENSMUST00000210309 Dnah11E9Q7N9 4488 aa2.99□□□□□ -1.93
Usp47-202ENSMUST00000210309 Dnah3Q8BW94 4083 aa2.99□□□□□ -1.93
Usp47-202ENSMUST00000210309 Dnah6E9Q0B6 4144 aa2.98□□□□□ -1.93
Usp47-202ENSMUST00000210309 Ubr4A2AN08 5180 aa2.97□□□□□ -1.93
Usp47-202ENSMUST00000210309 Gm17402F6Z0L5 76 aa2.96□□□□□ -1.93
Usp47-202ENSMUST00000210309 Kmt2aP55200 3966 aa2.96□□□□□ -1.94
Usp47-202ENSMUST00000210309 Crct1Q6PAI5 102 aa2.96□□□□□ -1.94
Usp47-202ENSMUST00000210309 2210017I01RikA0A0A6YVV1 95 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 4933428G20RikQ9D3X4 101 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Fat1A0A1L1SQU7 4645 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Herc1E9PZP8 4859 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Muc16A0A140LJ72 8478 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Dnah2P0C6F1 4456 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Dnhd1D3Z2X2 4750 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 Fras1Q80T14 4010 aa2.95□□□□□ -1.94
Usp47-202ENSMUST00000210309 A0A1Y7VLE6 161 aa2.93□□□□□ -1.94
Usp47-202ENSMUST00000210309 ApobE9Q414 4505 aa2.93□□□□□ -1.94
Usp47-202ENSMUST00000210309 Ryr2E9Q401 4966 aaKnown RBP2.92□□□□□ -1.94
Usp47-202ENSMUST00000210309 Dync2h1Q45VK7 4306 aa2.89□□□□□ -1.95
Usp47-202ENSMUST00000210309 Hectd4E9Q2E4 4418 aa2.86□□□□□ -1.95
Usp47-202ENSMUST00000210309 Kmt2cQ8BRH4 4903 aa2.85□□□□□ -1.95
Usp47-202ENSMUST00000210309 Krtap13-1Q8K198 168 aa2.85□□□□□ -1.95
Usp47-202ENSMUST00000210309 4932415D10RikA0A1W2P6U8 4986 aa2.83□□□□□ -1.96
Usp47-202ENSMUST00000210309 Gm6358A0A087WPH4 74 aa2.82□□□□□ -1.96
Usp47-202ENSMUST00000210309 Dnah7aE9Q0T8 4024 aa2.82□□□□□ -1.96
Usp47-202ENSMUST00000210309 Gm19668J3QMD1 248 aa2.82□□□□□ -1.96
Usp47-202ENSMUST00000210309 Krtap3-1A2A591 98 aa2.8□□□□□ -1.96
Usp47-202ENSMUST00000210309 Dnah7cA0A087WR13 4024 aa2.79□□□□□ -1.96
Usp47-202ENSMUST00000210309 Ush2AQ2QI47 5193 aa2.78□□□□□ -1.96
Usp47-202ENSMUST00000210309 Fat4Q2PZL6 4981 aa2.77□□□□□ -1.97
Usp47-202ENSMUST00000210309 Dnah1E9Q8T7 4250 aa2.76□□□□□ -1.97
Usp47-202ENSMUST00000210309 Hmcn2A2AJ76 5100 aa2.75□□□□□ -1.97
Usp47-202ENSMUST00000210309 ZanO88799 5376 aa2.73□□□□□ -1.97
Usp47-202ENSMUST00000210309 Krtap17-1A2A5X6 109 aa2.72□□□□□ -1.97
Usp47-202ENSMUST00000210309 Vps13bQ80TY5 3993 aa2.72□□□□□ -1.97
Usp47-202ENSMUST00000210309 Pkhd1E9PZ36 4059 aa2.71□□□□□ -1.98
Usp47-202ENSMUST00000210309 Pkd1O08852 4293 aa2.71□□□□□ -1.98
Usp47-202ENSMUST00000210309 Sprr2kO70562 68 aa2.7□□□□□ -1.98
Usp47-202ENSMUST00000210309 A030003K21RikA0A1Y7VIM3 128 aa2.69□□□□□ -1.98
Usp47-202ENSMUST00000210309 LorP18165 486 aa2.67□□□□□ -1.98
Usp47-202ENSMUST00000210309 Gm18596A0A1W2P860 280 aa2.66□□□□□ -1.98
Usp47-202ENSMUST00000210309 Lce1mQ9CR91 182 aa2.65□□□□□ -1.98
Usp47-202ENSMUST00000210309 Macf1Q9QXZ0 7354 aaKnown RBP2.65□□□□□ -1.98
Usp47-202ENSMUST00000210309 Krtap16-3Q8C1I6 86 aa2.65□□□□□ -1.99
Usp47-202ENSMUST00000210309 Krtap19-1Q925H2 87 aa2.64□□□□□ -1.99
Usp47-202ENSMUST00000210309 Krtap1-5A2A590 122 aa2.64□□□□□ -1.99
Usp47-202ENSMUST00000210309 Pkhd1l1Q80ZA4 4249 aa2.64□□□□□ -1.99
Usp47-202ENSMUST00000210309 Gm19402J3QJV4 266 aa2.64□□□□□ -1.99
Usp47-202ENSMUST00000210309 Krtap19-3Q925H6 87 aa2.63□□□□□ -1.99
Usp47-202ENSMUST00000210309 ObscnA2AAJ9 8891 aaKnown RBP2.62□□□□□ -1.99
Usp47-202ENSMUST00000210309 Krtap8-1O08633 61 aa2.6□□□□□ -1.99
Usp47-202ENSMUST00000210309 Krtap7-1Q9D3I6 87 aa2.57□□□□□ -2
Usp47-202ENSMUST00000210309 Krtap1-4Q3V2D6 188 aa2.57□□□□□ -2
Usp47-202ENSMUST00000210309 Sprr2a3Q4KL71 83 aa2.55□□□□□ -2
Usp47-202ENSMUST00000210309 Sprr2a1Q9CQK8 83 aa2.55□□□□□ -2
Usp47-202ENSMUST00000210309 Gm7735D3YX18 52 aa2.54□□□□□ -2
Usp47-202ENSMUST00000210309 A0A1Y7VJH8 109 aa2.54□□□□□ -2
Usp47-202ENSMUST00000210309 Krtap28-10A0A1Y7VP58 119 aa2.54□□□□□ -2
Usp47-202ENSMUST00000210309 Prm1P02319 51 aa2.53□□□□□ -2
Usp47-202ENSMUST00000210309 Gm6217A0A1Y7VJK9 128 aa2.53□□□□□ -2
Usp47-202ENSMUST00000210309 Krtap12-1Q9Z287 130 aa2.53□□□□□ -2
Usp47-202ENSMUST00000210309 Sprr2gO70558 76 aa2.52□□□□□ -2.01
Usp47-202ENSMUST00000210309 Fat2Q5F226 4351 aa2.52□□□□□ -2.01
Usp47-202ENSMUST00000210309 Krtap19-9aF8WH65 55 aa2.5□□□□□ -2.01
Usp47-202ENSMUST00000210309 Krtap1-3A2A588 173 aa2.5□□□□□ -2.01
Usp47-202ENSMUST00000210309 Gm9789Q8BIG3 52 aa2.46□□□□□ -2.02
Usp47-202ENSMUST00000210309 Krtap19-9bQ99NG9 58 aa2.45□□□□□ -2.02
Usp47-202ENSMUST00000210309 Lce1jD3YUU5 139 aa2.44□□□□□ -2.02
Usp47-202ENSMUST00000210309 Krtap28-13A0A087WQP5 138 aa2.41□□□□□ -2.02
Usp47-202ENSMUST00000210309 Gm7544A0A1Y7VJ58 118 aa2.41□□□□□ -2.02
Usp47-202ENSMUST00000210309 SspoQ8CG65 4998 aa2.4□□□□□ -2.03
Usp47-202ENSMUST00000210309 Krtap9-5A2A5X3 358 aa2.39□□□□□ -2.03
Usp47-202ENSMUST00000210309 Krtap19-2Q925I0 141 aa2.39□□□□□ -2.03
Usp47-202ENSMUST00000210309 Fsip2A2ARZ3 6995 aa2.38□□□□□ -2.03
Usp47-202ENSMUST00000210309 DstQ91ZU6 7393 aaKnown RBP2.38□□□□□ -2.03
Usp47-202ENSMUST00000210309 A030005L19RikA0A1Y7VIU2 113 aa2.37□□□□□ -2.03
Usp47-202ENSMUST00000210309 A0A1Y7VJ07 166 aa2.36□□□□□ -2.03
Usp47-202ENSMUST00000210309 A030005K14RikA0A1Y7VNY1 122 aa2.35□□□□□ -2.03
Usp47-202ENSMUST00000210309 Lce3bQ9CQM7 98 aa2.34□□□□□ -2.04
Usp47-202ENSMUST00000210309 2310046K23RikA0A0A6YVW6 87 aa2.33□□□□□ -2.04
Usp47-202ENSMUST00000210309 Gm10061D3Z714 54 aa2.33□□□□□ -2.04
Usp47-202ENSMUST00000210309 Lce3cQ91V05 98 aa2.31□□□□□ -2.04
Usp47-202ENSMUST00000210309 Gm11562A0PK51 136 aa2.31□□□□□ -2.04
Usp47-202ENSMUST00000210309 Mt2P02798 61 aa2.29□□□□□ -2.04
Usp47-202ENSMUST00000210309 Gm38119A0A0A6YX29 146 aa2.29□□□□□ -2.04
Usp47-202ENSMUST00000210309 Gm10272F7CZ33 110 aa2.26□□□□□ -2.05
Usp47-202ENSMUST00000210309 Muc5bE9Q5I3 4800 aa2.26□□□□□ -2.05
Usp47-202ENSMUST00000210309 Gm10100J3QK64 120 aa2.24□□□□□ -2.05
Usp47-202ENSMUST00000210309 Lce1gQ9D195 139 aa2.23□□□□□ -2.05
Usp47-202ENSMUST00000210309 Lce1iQ9D6P5 149 aa2.23□□□□□ -2.05
Usp47-202ENSMUST00000210309 Lce1hQ9D6R3 140 aa2.23□□□□□ -2.05
Usp47-202ENSMUST00000210309 Lce3eF8VQJ0 98 aa2.22□□□□□ -2.05
Usp47-202ENSMUST00000210309 Lce3fQ6PAI4 98 aa2.22□□□□□ -2.05
Usp47-202ENSMUST00000210309 Krtap22-2J3QNX6 67 aa2.22□□□□□ -2.05
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms