RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Ndufaf8A2AMZ4 74 aa6.56□□□□□ -1.36
Pdgfra-205ENSMUST00000201711 HydinQ80W93 5154 aa6.55□□□□□ -1.36
Pdgfra-205ENSMUST00000201711 2210017I01RikA0A0A6YVV1 95 aa6.52□□□□□ -1.37
Pdgfra-205ENSMUST00000201711 Fat1A0A1L1SQU7 4645 aa6.51□□□□□ -1.37
Pdgfra-205ENSMUST00000201711 Gm21887J3QQ04 176 aa6.48□□□□□ -1.37
Pdgfra-205ENSMUST00000201711 Vps13bQ80TY5 3993 aa6.47□□□□□ -1.37
Pdgfra-205ENSMUST00000201711 SacsQ9JLC8 4582 aa6.46□□□□□ -1.38
Pdgfra-205ENSMUST00000201711 B930094E09RikQ8C4T2 136 aa6.45□□□□□ -1.38
Pdgfra-205ENSMUST00000201711 Kiaa1109A2AAE1 5005 aa6.44□□□□□ -1.38
Pdgfra-205ENSMUST00000201711 Krtap13-1Q8K198 168 aa6.44□□□□□ -1.38
Pdgfra-205ENSMUST00000201711 Krtap3-1A2A591 98 aa6.38□□□□□ -1.39
Pdgfra-205ENSMUST00000201711 Lrp2A2ARV4 4660 aa6.38□□□□□ -1.39
Pdgfra-205ENSMUST00000201711 Gm40193A0A1B0GT39 78 aa6.36□□□□□ -1.39
Pdgfra-205ENSMUST00000201711 Herc2Q4U2R1 4836 aa6.36□□□□□ -1.39
Pdgfra-205ENSMUST00000201711 Pkd1O08852 4293 aa6.32□□□□□ -1.4
Pdgfra-205ENSMUST00000201711 Gm18596A0A1W2P860 280 aa6.24□□□□□ -1.41
Pdgfra-205ENSMUST00000201711 Fat2Q5F226 4351 aa6.24□□□□□ -1.41
Pdgfra-205ENSMUST00000201711 Gm17402F6Z0L5 76 aa6.22□□□□□ -1.41
Pdgfra-205ENSMUST00000201711 Prm2P07978 107 aa6.22□□□□□ -1.41
Pdgfra-205ENSMUST00000201711 Abca13Q5SSE9 5034 aa6.2□□□□□ -1.42
Pdgfra-205ENSMUST00000201711 Ryr2E9Q401 4966 aaKnown RBP6.16□□□□□ -1.42
Pdgfra-205ENSMUST00000201711 Gm9112A2AI92 75 aa6.15□□□□□ -1.42
Pdgfra-205ENSMUST00000201711 Dnah8Q91XQ0 4731 aa6.05□□□□□ -1.44
Pdgfra-205ENSMUST00000201711 Pkhd1l1Q80ZA4 4249 aa6.03□□□□□ -1.44
Pdgfra-205ENSMUST00000201711 Krtap7-1Q9D3I6 87 aa6□□□□□ -1.45
Pdgfra-205ENSMUST00000201711 Lce1mQ9CR91 182 aa5.98□□□□□ -1.45
Pdgfra-205ENSMUST00000201711 Kmt2cQ8BRH4 4903 aa5.95□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 Krtap1-5A2A590 122 aa5.95□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 LorP18165 486 aa5.95□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 Dnhd1D3Z2X2 4750 aa5.95□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 Gm19402J3QJV4 266 aa5.94□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 Tnp1P10856 55 aa5.94□□□□□ -1.46
Pdgfra-205ENSMUST00000201711 Gm19668J3QMD1 248 aa5.89□□□□□ -1.47
Pdgfra-205ENSMUST00000201711 Pkhd1E9PZ36 4059 aa5.88□□□□□ -1.47
Pdgfra-205ENSMUST00000201711 PcloQ9QYX7 5068 aa5.83□□□□□ -1.48
Pdgfra-205ENSMUST00000201711 Krtap16-3Q8C1I6 86 aa5.81□□□□□ -1.48
Pdgfra-205ENSMUST00000201711 Sprr2a3Q4KL71 83 aa5.8□□□□□ -1.48
Pdgfra-205ENSMUST00000201711 Sprr2a1Q9CQK8 83 aa5.8□□□□□ -1.48
Pdgfra-205ENSMUST00000201711 Krtap1-4Q3V2D6 188 aa5.78□□□□□ -1.48
Pdgfra-205ENSMUST00000201711 Herc1E9PZP8 4859 aa5.76□□□□□ -1.49
Pdgfra-205ENSMUST00000201711 Birc6O88738 4882 aa5.75□□□□□ -1.49
Pdgfra-205ENSMUST00000201711 Krtap19-3Q925H6 87 aa5.74□□□□□ -1.49
Pdgfra-205ENSMUST00000201711 Ubr4A2AN08 5180 aa5.69□□□□□ -1.5
Pdgfra-205ENSMUST00000201711 Krtap19-1Q925H2 87 aa5.68□□□□□ -1.5
Pdgfra-205ENSMUST00000201711 Krtap19-9aF8WH65 55 aa5.62□□□□□ -1.51
Pdgfra-205ENSMUST00000201711 Krtap12-1Q9Z287 130 aa5.61□□□□□ -1.51
Pdgfra-205ENSMUST00000201711 Prm1P02319 51 aa5.56□□□□□ -1.52
Pdgfra-205ENSMUST00000201711 Gm7735D3YX18 52 aa5.5□□□□□ -1.53
Pdgfra-205ENSMUST00000201711 Fat4Q2PZL6 4981 aa5.48□□□□□ -1.53
Pdgfra-205ENSMUST00000201711 Krtap1-3A2A588 173 aa5.46□□□□□ -1.54
Pdgfra-205ENSMUST00000201711 4932415D10RikA0A1W2P6U8 4986 aa5.43□□□□□ -1.54
Pdgfra-205ENSMUST00000201711 ZanO88799 5376 aa5.43□□□□□ -1.54
Pdgfra-205ENSMUST00000201711 Mdn1A2ANY6 5589 aaKnown RBP5.43□□□□□ -1.54
Pdgfra-205ENSMUST00000201711 Lce1jD3YUU5 139 aa5.42□□□□□ -1.54
Pdgfra-205ENSMUST00000201711 Ush2AQ2QI47 5193 aa5.39□□□□□ -1.55
Pdgfra-205ENSMUST00000201711 Gm9789Q8BIG3 52 aa5.38□□□□□ -1.55
Pdgfra-205ENSMUST00000201711 Krtap9-5A2A5X3 358 aa5.36□□□□□ -1.55
Pdgfra-205ENSMUST00000201711 Hmcn2A2AJ76 5100 aa5.3□□□□□ -1.56
Pdgfra-205ENSMUST00000201711 Krtap19-9bQ99NG9 58 aa5.29□□□□□ -1.56
Pdgfra-205ENSMUST00000201711 Rnf213E9Q555 5152 aaKnown RBP5.28□□□□□ -1.56
Pdgfra-205ENSMUST00000201711 Krtap8-1O08633 61 aa5.25□□□□□ -1.57
Pdgfra-205ENSMUST00000201711 Gm6358A0A087WPH4 74 aa5.22□□□□□ -1.57
Pdgfra-205ENSMUST00000201711 A0A1Y7VJH8 109 aa5.2□□□□□ -1.58
Pdgfra-205ENSMUST00000201711 Krtap19-2Q925I0 141 aa5.19□□□□□ -1.58
Pdgfra-205ENSMUST00000201711 Krtap17-1A2A5X6 109 aa5.14□□□□□ -1.59
Pdgfra-205ENSMUST00000201711 Sprr2kO70562 68 aa5.13□□□□□ -1.59
Pdgfra-205ENSMUST00000201711 4933428G20RikQ9D3X4 101 aa5.11□□□□□ -1.59
Pdgfra-205ENSMUST00000201711 Gm10061D3Z714 54 aa5.09□□□□□ -1.59
Pdgfra-205ENSMUST00000201711 Krtap28-10A0A1Y7VP58 119 aa5.06□□□□□ -1.6
Pdgfra-205ENSMUST00000201711 2310046K23RikA0A0A6YVW6 87 aa5.05□□□□□ -1.6
Pdgfra-205ENSMUST00000201711 Mt2P02798 61 aa5.05□□□□□ -1.6
Pdgfra-205ENSMUST00000201711 Gm11569B1AQB1 180 aa4.99□□□□□ -1.61
Pdgfra-205ENSMUST00000201711 Lce1iQ9D6P5 149 aa4.98□□□□□ -1.61
Pdgfra-205ENSMUST00000201711 Lce1a2Q9D1K4 149 aa4.94□□□□□ -1.62
Pdgfra-205ENSMUST00000201711 A0A1Y7VLE6 161 aa4.92□□□□□ -1.62
Pdgfra-205ENSMUST00000201711 Krtap28-13A0A087WQP5 138 aa4.91□□□□□ -1.62
Pdgfra-205ENSMUST00000201711 Syne1Q6ZWR6 8799 aa4.87□□□□□ -1.63
Pdgfra-205ENSMUST00000201711 Gm10272F7CZ33 110 aa4.84□□□□□ -1.63
Pdgfra-205ENSMUST00000201711 Krtap22-2J3QNX6 67 aa4.83□□□□□ -1.64
Pdgfra-205ENSMUST00000201711 Krtap4-2B1AQ85 167 aa4.81□□□□□ -1.64
Pdgfra-205ENSMUST00000201711 Krtap4-1Q3UUY3 169 aa4.81□□□□□ -1.64
Pdgfra-205ENSMUST00000201711 Krtap9-3Q3V2C1 136 aa4.78□□□□□ -1.64
Pdgfra-205ENSMUST00000201711 Sprr2gO70558 76 aa4.77□□□□□ -1.65
Pdgfra-205ENSMUST00000201711 Gm38119A0A0A6YX29 146 aa4.75□□□□□ -1.65
Pdgfra-205ENSMUST00000201711 Krtap4-6Q3V4B7 195 aa4.73□□□□□ -1.65
Pdgfra-205ENSMUST00000201711 A030005K14RikA0A1Y7VNY1 122 aa4.72□□□□□ -1.65
Pdgfra-205ENSMUST00000201711 Fsip2A2ARZ3 6995 aa4.69□□□□□ -1.66
Pdgfra-205ENSMUST00000201711 A030005L19RikA0A1Y7VIU2 113 aa4.68□□□□□ -1.66
Pdgfra-205ENSMUST00000201711 Lce1hQ9D6R3 140 aa4.68□□□□□ -1.66
Pdgfra-205ENSMUST00000201711 Lce1gQ9D195 139 aa4.68□□□□□ -1.66
Pdgfra-205ENSMUST00000201711 Muc16A0A140LJ72 8478 aa4.64□□□□□ -1.67
Pdgfra-205ENSMUST00000201711 Mt4P47945 62 aa4.59□□□□□ -1.68
Pdgfra-205ENSMUST00000201711 Lce3bQ9CQM7 98 aa4.58□□□□□ -1.68
Pdgfra-205ENSMUST00000201711 SspoQ8CG65 4998 aa4.58□□□□□ -1.68
Pdgfra-205ENSMUST00000201711 Gm10100J3QK64 120 aa4.56□□□□□ -1.68
Pdgfra-205ENSMUST00000201711 Muc5bE9Q5I3 4800 aa4.54□□□□□ -1.68
Pdgfra-205ENSMUST00000201711 Gm11555B1AQ89 175 aa4.51□□□□□ -1.69
Pdgfra-205ENSMUST00000201711 Gm11596B1AQB0 205 aa4.51□□□□□ -1.69
Pdgfra-205ENSMUST00000201711 Macf1Q9QXZ0 7354 aaKnown RBP4.5□□□□□ -1.69
Pdgfra-205ENSMUST00000201711 Lce3cQ91V05 98 aa4.5□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms