RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Ush2AQ2QI47 5193 aa12.41□□□□□ -0.42
Smarcc1-203ENSMUST00000197480 Krtap3-1A2A591 98 aa12.37□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Gm17606F6ZL36 78 aa12.35□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Hmcn2A2AJ76 5100 aa12.35□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Krtap13-1Q8K198 168 aa12.34□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Krtap16-3Q8C1I6 86 aa12.3□□□□□ -0.44
Smarcc1-203ENSMUST00000197480 Crct1Q6PAI5 102 aa12.28□□□□□ -0.44
Smarcc1-203ENSMUST00000197480 Gm10382Q3V0T5 144 aa12.27□□□□□ -0.45
Smarcc1-203ENSMUST00000197480 Sec61gP60060 68 aa12.26□□□□□ -0.45
Smarcc1-203ENSMUST00000197480 Gm9789Q8BIG3 52 aa12.21□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Krtap19-1Q925H2 87 aa12.2□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Fam229aB2KGE5 128 aa12.17□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Prm1P02319 51 aa12.15□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Krtap19-3Q925H6 87 aa12.13□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Krtap1-5A2A590 122 aa12.13□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Gm10318A0A1W2P728 225 aa12.12□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Ubr4A2AN08 5180 aa12.11□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Gm7735D3YX18 52 aa12.07□□□□□ -0.48
Smarcc1-203ENSMUST00000197480 Krtap1-3A2A588 173 aa12.04□□□□□ -0.48
Smarcc1-203ENSMUST00000197480 4932415D10RikA0A1W2P6U8 4986 aa12.02□□□□□ -0.49
Smarcc1-203ENSMUST00000197480 Gm3646F6S692 53 aa11.98□□□□□ -0.49
Smarcc1-203ENSMUST00000197480 ZanO88799 5376 aa11.94□□□□□ -0.5
Smarcc1-203ENSMUST00000197480 Gm9955Q8CEJ8 102 aa11.94□□□□□ -0.5
Smarcc1-203ENSMUST00000197480 Gm20537G3UYK7 97 aa11.9□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 Gm19402J3QJV4 266 aa11.87□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 BC029722A0A0N4SW31 51 aa11.86□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 Ndufs5Q99LY9 106 aa11.8□□□□□ -0.52
Smarcc1-203ENSMUST00000197480 LorP18165 486 aa11.72□□□□□ -0.53
Smarcc1-203ENSMUST00000197480 1700042G07RikB1AUF7 90 aa11.7□□□□□ -0.54
Smarcc1-203ENSMUST00000197480 Fat4Q2PZL6 4981 aa11.64□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Rnf213E9Q555 5152 aaKnown RBP11.62□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Gm19426M0QWC7 77 aa11.62□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Krtap1-4Q3V2D6 188 aa11.61□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Gm3880A0A1B0GSB3 72 aa11.53□□□□□ -0.56
Smarcc1-203ENSMUST00000197480 Pla2g10Q9QXX3 151 aa11.42□□□□□ -0.58
Smarcc1-203ENSMUST00000197480 Spink7Q6IE32 76 aa11.34□□□□□ -0.59
Smarcc1-203ENSMUST00000197480 B930094E09RikQ8C4T2 136 aa11.33□□□□□ -0.6
Smarcc1-203ENSMUST00000197480 Gm17402F6Z0L5 76 aa11.32□□□□□ -0.6
Smarcc1-203ENSMUST00000197480 CriptO70333 101 aa11.23□□□□□ -0.61
Smarcc1-203ENSMUST00000197480 SspoQ8CG65 4998 aa11.21□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Sprr2a3Q4KL71 83 aa11.19□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Sprr2a1Q9CQK8 83 aa11.19□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Lce1jD3YUU5 139 aa11.15□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Krtap12-1Q9Z287 130 aa11.1□□□□□ -0.63
Smarcc1-203ENSMUST00000197480 Gm12216A0A1W2P827 62 aa11.02□□□□□ -0.65
Smarcc1-203ENSMUST00000197480 Krtap19-9aF8WH65 55 aa10.97□□□□□ -0.65
Smarcc1-203ENSMUST00000197480 Romo1P60603 79 aa10.95□□□□□ -0.66
Smarcc1-203ENSMUST00000197480 Gm10061D3Z714 54 aa10.91□□□□□ -0.66
Smarcc1-203ENSMUST00000197480 Krtap17-1A2A5X6 109 aa10.83□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Gm21887J3QQ04 176 aa10.83□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Krtap19-2Q925I0 141 aa10.8□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Prm2P07978 107 aa10.79□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Krtap9-5A2A5X3 358 aa10.74□□□□□ -0.69
Smarcc1-203ENSMUST00000197480 Gm19668J3QMD1 248 aa10.58□□□□□ -0.72
Smarcc1-203ENSMUST00000197480 Lce1iQ9D6P5 149 aa10.48□□□□□ -0.73
Smarcc1-203ENSMUST00000197480 Camk2n1Q6QWF9 78 aa10.47□□□□□ -0.73
Smarcc1-203ENSMUST00000197480 Muc5bE9Q5I3 4800 aa10.43□□□□□ -0.74
Smarcc1-203ENSMUST00000197480 Gm11569B1AQB1 180 aa10.37□□□□□ -0.75
Smarcc1-203ENSMUST00000197480 Lce1a2Q9D1K4 149 aa10.35□□□□□ -0.75
Smarcc1-203ENSMUST00000197480 Gm6358A0A087WPH4 74 aa10.21□□□□□ -0.78
Smarcc1-203ENSMUST00000197480 Krtap8-1O08633 61 aa10.03□□□□□ -0.8
Smarcc1-203ENSMUST00000197480 Krtap7-1Q9D3I6 87 aa10.01□□□□□ -0.81
Smarcc1-203ENSMUST00000197480 Mt2P02798 61 aa9.97□□□□□ -0.81
Smarcc1-203ENSMUST00000197480 Krtap19-9bQ99NG9 58 aa9.94□□□□□ -0.82
Smarcc1-203ENSMUST00000197480 Gm40193A0A1B0GT39 78 aa9.82□□□□□ -0.84
Smarcc1-203ENSMUST00000197480 Mdn1A2ANY6 5589 aaKnown RBP9.66□□□□□ -0.86
Smarcc1-203ENSMUST00000197480 Mp68P56379 58 aa9.65□□□□□ -0.86
Smarcc1-203ENSMUST00000197480 Gm20538F6Z9R1 75 aa9.55□□□□□ -0.88
Smarcc1-203ENSMUST00000197480 Gm11555B1AQ89 175 aa9.52□□□□□ -0.88
Smarcc1-203ENSMUST00000197480 Lce1gQ9D195 139 aa9.52□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Tnp1P10856 55 aa9.51□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap4-2B1AQ85 167 aa9.5□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap4-6Q3V4B7 195 aa9.46□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap9-3Q3V2C1 136 aa9.44□□□□□ -0.9
Smarcc1-203ENSMUST00000197480 Krtap22-2J3QNX6 67 aa9.43□□□□□ -0.9
Smarcc1-203ENSMUST00000197480 Lce1hQ9D6R3 140 aa9.36□□□□□ -0.91
Smarcc1-203ENSMUST00000197480 Gm11562A0PK51 136 aa9.29□□□□□ -0.92
Smarcc1-203ENSMUST00000197480 Krtap4-1Q3UUY3 169 aa9.28□□□□□ -0.92
Smarcc1-203ENSMUST00000197480 Gm11596B1AQB0 205 aa9.25□□□□□ -0.93
Smarcc1-203ENSMUST00000197480 Syne2Q6ZWQ0 6874 aaKnown RBP9.15□□□□□ -0.94
Smarcc1-203ENSMUST00000197480 2310046K23RikA0A0A6YVW6 87 aa9.04□□□□□ -0.96
Smarcc1-203ENSMUST00000197480 Ndufaf8A2AMZ4 74 aa9.02□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11564A2A4L9 201 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11563B1AQ90 168 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11595B1AQA7 289 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Krtap4-8B1AQA8 209 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Mt4P47945 62 aa8.79□□□□□ -1
Smarcc1-203ENSMUST00000197480 Krtap4-9B1AQA9 244 aa8.78□□□□□ -1
Smarcc1-203ENSMUST00000197480 Gm10272F7CZ33 110 aa8.72□□□□□ -1.01
Smarcc1-203ENSMUST00000197480 Lce1bQ9D149 137 aa8.66□□□□□ -1.02
Smarcc1-203ENSMUST00000197480 Fsip2A2ARZ3 6995 aa8.56□□□□□ -1.04
Smarcc1-203ENSMUST00000197480 Gm38119A0A0A6YX29 146 aa8.55□□□□□ -1.04
Smarcc1-203ENSMUST00000197480 Krtap4-13Q9D7P3 165 aa8.46□□□□□ -1.06
Smarcc1-203ENSMUST00000197480 Krtap4-7Q9D732 168 aa8.35□□□□□ -1.07
Smarcc1-203ENSMUST00000197480 2300003K06RikA2A4M0 262 aa8.35□□□□□ -1.07
Smarcc1-203ENSMUST00000197480 Syne1Q6ZWR6 8799 aa8.32□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 Gm11938Q9D3H4 131 aa8.31□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 Sprr2kO70562 68 aa8.29□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 A0A1Y7VJH8 109 aa8.23□□□□□ -1.09
Smarcc1-203ENSMUST00000197480 Lce3bQ9CQM7 98 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms