RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Pkd1O08852 4293 aa6.14□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Dnah7bL7N1Y0 4068 aa6.14□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Dnah3Q8BW94 4083 aa6.12□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Gm18596A0A1W2P860 280 aa6.12□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Dnah1E9Q8T7 4250 aa6.1□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Dnah6E9Q0B6 4144 aa6.09□□□□□ -1.43
Pcdha1-202ENSMUST00000193839 Sprr2a3Q4KL71 83 aa6.08□□□□□ -1.44
Pcdha1-202ENSMUST00000193839 Sprr2a1Q9CQK8 83 aa6.08□□□□□ -1.44
Pcdha1-202ENSMUST00000193839 Kmt2aP55200 3966 aa6.05□□□□□ -1.44
Pcdha1-202ENSMUST00000193839 Lrp1bQ9JI18 4599 aa6.02□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 Krtap1-4Q3V2D6 188 aa6.01□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 Csmd3Q80T79 3707 aa6□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 SacsQ9JLC8 4582 aa6□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 Krtap19-9aF8WH65 55 aa5.99□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 Lce1mQ9CR91 182 aa5.97□□□□□ -1.45
Pcdha1-202ENSMUST00000193839 LorP18165 486 aa5.96□□□□□ -1.46
Pcdha1-202ENSMUST00000193839 Gm19402J3QJV4 266 aa5.92□□□□□ -1.46
Pcdha1-202ENSMUST00000193839 Mycbp2Q7TPH6 4711 aa5.92□□□□□ -1.46
Pcdha1-202ENSMUST00000193839 Ryr3A2AGL3 4863 aa5.91□□□□□ -1.46
Pcdha1-202ENSMUST00000193839 Fat1A0A1L1SQU7 4645 aa5.87□□□□□ -1.47
Pcdha1-202ENSMUST00000193839 Hectd4E9Q2E4 4418 aa5.87□□□□□ -1.47
Pcdha1-202ENSMUST00000193839 Dnah8Q91XQ0 4731 aa5.85□□□□□ -1.47
Pcdha1-202ENSMUST00000193839 Fat3Q8BNA6 4555 aa5.84□□□□□ -1.47
Pcdha1-202ENSMUST00000193839 Krtap12-1Q9Z287 130 aa5.83□□□□□ -1.48
Pcdha1-202ENSMUST00000193839 Ryr2E9Q401 4966 aaKnown RBP5.81□□□□□ -1.48
Pcdha1-202ENSMUST00000193839 Fras1Q80T14 4010 aa5.81□□□□□ -1.48
Pcdha1-202ENSMUST00000193839 Herc2Q4U2R1 4836 aa5.75□□□□□ -1.49
Pcdha1-202ENSMUST00000193839 Kiaa1109A2AAE1 5005 aa5.74□□□□□ -1.49
Pcdha1-202ENSMUST00000193839 Prm1P02319 51 aa5.74□□□□□ -1.49
Pcdha1-202ENSMUST00000193839 Krtap16-3Q8C1I6 86 aa5.73□□□□□ -1.49
Pcdha1-202ENSMUST00000193839 Krtap19-3Q925H6 87 aa5.71□□□□□ -1.49
Pcdha1-202ENSMUST00000193839 Krtap19-9bQ99NG9 58 aa5.69□□□□□ -1.5
Pcdha1-202ENSMUST00000193839 Krtap8-1O08633 61 aa5.68□□□□□ -1.5
Pcdha1-202ENSMUST00000193839 Lrp1Q91ZX7 4545 aaKnown RBP5.66□□□□□ -1.5
Pcdha1-202ENSMUST00000193839 Krtap19-1Q925H2 87 aa5.66□□□□□ -1.5
Pcdha1-202ENSMUST00000193839 Dnah7cA0A087WR13 4024 aa5.65□□□□□ -1.51
Pcdha1-202ENSMUST00000193839 Dnah7aE9Q0T8 4024 aa5.63□□□□□ -1.51
Pcdha1-202ENSMUST00000193839 Fat2Q5F226 4351 aa5.6□□□□□ -1.51
Pcdha1-202ENSMUST00000193839 Lrp2A2ARV4 4660 aa5.55□□□□□ -1.52
Pcdha1-202ENSMUST00000193839 HydinQ80W93 5154 aa5.54□□□□□ -1.52
Pcdha1-202ENSMUST00000193839 Gm7735D3YX18 52 aa5.54□□□□□ -1.52
Pcdha1-202ENSMUST00000193839 Gm6358A0A087WPH4 74 aa5.45□□□□□ -1.54
Pcdha1-202ENSMUST00000193839 Krtap9-5A2A5X3 358 aa5.45□□□□□ -1.54
Pcdha1-202ENSMUST00000193839 Dnhd1D3Z2X2 4750 aa5.45□□□□□ -1.54
Pcdha1-202ENSMUST00000193839 Gm9789Q8BIG3 52 aa5.45□□□□□ -1.54
Pcdha1-202ENSMUST00000193839 Birc6O88738 4882 aa5.44□□□□□ -1.54
Pcdha1-202ENSMUST00000193839 Krtap1-3A2A588 173 aa5.4□□□□□ -1.55
Pcdha1-202ENSMUST00000193839 2310046K23RikA0A0A6YVW6 87 aa5.36□□□□□ -1.55
Pcdha1-202ENSMUST00000193839 Sprr2kO70562 68 aa5.32□□□□□ -1.56
Pcdha1-202ENSMUST00000193839 Herc1E9PZP8 4859 aa5.31□□□□□ -1.56
Pcdha1-202ENSMUST00000193839 Pkhd1l1Q80ZA4 4249 aa5.27□□□□□ -1.57
Pcdha1-202ENSMUST00000193839 Krtap19-2Q925I0 141 aa5.25□□□□□ -1.57
Pcdha1-202ENSMUST00000193839 Vps13bQ80TY5 3993 aa5.21□□□□□ -1.57
Pcdha1-202ENSMUST00000193839 Mt2P02798 61 aa5.17□□□□□ -1.58
Pcdha1-202ENSMUST00000193839 PcloQ9QYX7 5068 aa5.16□□□□□ -1.58
Pcdha1-202ENSMUST00000193839 Kmt2cQ8BRH4 4903 aa5.16□□□□□ -1.58
Pcdha1-202ENSMUST00000193839 Lce1jD3YUU5 139 aa5.15□□□□□ -1.59
Pcdha1-202ENSMUST00000193839 Abca13Q5SSE9 5034 aa5.14□□□□□ -1.59
Pcdha1-202ENSMUST00000193839 Pkhd1E9PZ36 4059 aa5.14□□□□□ -1.59
Pcdha1-202ENSMUST00000193839 Gm10061D3Z714 54 aa5.13□□□□□ -1.59
Pcdha1-202ENSMUST00000193839 Krtap22-2J3QNX6 67 aa5.12□□□□□ -1.59
Pcdha1-202ENSMUST00000193839 Sprr2gO70558 76 aa5.05□□□□□ -1.6
Pcdha1-202ENSMUST00000193839 Lce3bQ9CQM7 98 aa4.98□□□□□ -1.61
Pcdha1-202ENSMUST00000193839 4932415D10RikA0A1W2P6U8 4986 aa4.97□□□□□ -1.61
Pcdha1-202ENSMUST00000193839 Gm11569B1AQB1 180 aa4.94□□□□□ -1.62
Pcdha1-202ENSMUST00000193839 Gm10272F7CZ33 110 aa4.94□□□□□ -1.62
Pcdha1-202ENSMUST00000193839 Gm10100J3QK64 120 aa4.91□□□□□ -1.62
Pcdha1-202ENSMUST00000193839 ZanO88799 5376 aa4.85□□□□□ -1.63
Pcdha1-202ENSMUST00000193839 Fat4Q2PZL6 4981 aa4.84□□□□□ -1.63
Pcdha1-202ENSMUST00000193839 Lce3cQ91V05 98 aa4.83□□□□□ -1.64
Pcdha1-202ENSMUST00000193839 Gm10142J3KMP7 120 aa4.82□□□□□ -1.64
Pcdha1-202ENSMUST00000193839 Lce1iQ9D6P5 149 aa4.78□□□□□ -1.64
Pcdha1-202ENSMUST00000193839 Gm38119A0A0A6YX29 146 aa4.76□□□□□ -1.65
Pcdha1-202ENSMUST00000193839 Ubr4A2AN08 5180 aa4.74□□□□□ -1.65
Pcdha1-202ENSMUST00000193839 Mdn1A2ANY6 5589 aaKnown RBP4.73□□□□□ -1.65
Pcdha1-202ENSMUST00000193839 Ush2AQ2QI47 5193 aa4.73□□□□□ -1.65
Pcdha1-202ENSMUST00000193839 Lce3eF8VQJ0 98 aa4.69□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Lce3fQ6PAI4 98 aa4.69□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Lce1a2Q9D1K4 149 aa4.69□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Sprr2iO70560 76 aa4.68□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Lce3dE9Q8V1 98 aa4.67□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Krtap9-3Q3V2C1 136 aa4.65□□□□□ -1.66
Pcdha1-202ENSMUST00000193839 Krtap4-2B1AQ85 167 aa4.64□□□□□ -1.67
Pcdha1-202ENSMUST00000193839 Krtap19-4Q925H7 84 aa4.6□□□□□ -1.67
Pcdha1-202ENSMUST00000193839 Lce1gQ9D195 139 aa4.59□□□□□ -1.67
Pcdha1-202ENSMUST00000193839 Krtap4-6Q3V4B7 195 aa4.58□□□□□ -1.68
Pcdha1-202ENSMUST00000193839 Rnf213E9Q555 5152 aaKnown RBP4.55□□□□□ -1.68
Pcdha1-202ENSMUST00000193839 Lce3aQ497I5 98 aa4.54□□□□□ -1.68
Pcdha1-202ENSMUST00000193839 Lce1fB9EJP6 147 aa4.51□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Lce1cQ9D1C5 147 aa4.51□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Lce1lQ9D1G7 135 aa4.51□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Lce1dQ9D731 133 aa4.51□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Hmcn2A2AJ76 5100 aa4.51□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Mt4P47945 62 aa4.5□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Lce1bQ9D149 137 aa4.5□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Muc5bE9Q5I3 4800 aa4.49□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Krtap17-1A2A5X6 109 aa4.47□□□□□ -1.69
Pcdha1-202ENSMUST00000193839 Krtap4-1Q3UUY3 169 aa4.43□□□□□ -1.7
Pcdha1-202ENSMUST00000193839 Sprr2dO70555 85 aa4.41□□□□□ -1.7
Pcdha1-202ENSMUST00000193839 Gm11596B1AQB0 205 aa4.41□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 163.8 ms