RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Rpl37Q9D823 97 aa6.99□□□□□ -1.29
Rnf4-204ENSMUST00000182047 Gm10382Q3V0T5 144 aa6.95□□□□□ -1.3
Rnf4-204ENSMUST00000182047 Rnase13Q5GAM7 153 aa6.95□□□□□ -1.3
Rnf4-204ENSMUST00000182047 Herc1E9PZP8 4859 aa6.89□□□□□ -1.31
Rnf4-204ENSMUST00000182047 Gm17606F6ZL36 78 aa6.87□□□□□ -1.31
Rnf4-204ENSMUST00000182047 Gm9955Q8CEJ8 102 aa6.85□□□□□ -1.31
Rnf4-204ENSMUST00000182047 2310057N15RikQ9D6T8 200 aa6.8□□□□□ -1.32
Rnf4-204ENSMUST00000182047 Gm17416Q30KP4 66 aa6.75□□□□□ -1.33
Rnf4-204ENSMUST00000182047 Romo1P60603 79 aa6.72□□□□□ -1.33
Rnf4-204ENSMUST00000182047 Mp68P56379 58 aa6.67□□□□□ -1.34
Rnf4-204ENSMUST00000182047 Lce1mQ9CR91 182 aa6.67□□□□□ -1.34
Rnf4-204ENSMUST00000182047 Krtap3-1A2A591 98 aa6.62□□□□□ -1.35
Rnf4-204ENSMUST00000182047 Gm21887J3QQ04 176 aa6.62□□□□□ -1.35
Rnf4-204ENSMUST00000182047 Sec61bQ9CQS8 96 aaKnown RBP6.61□□□□□ -1.35
Rnf4-204ENSMUST00000182047 2210017I01RikA0A0A6YVV1 95 aa6.6□□□□□ -1.35
Rnf4-204ENSMUST00000182047 Crct1Q6PAI5 102 aa6.6□□□□□ -1.35
Rnf4-204ENSMUST00000182047 Gm10318A0A1W2P728 225 aa6.58□□□□□ -1.36
Rnf4-204ENSMUST00000182047 Ush2AQ2QI47 5193 aa6.58□□□□□ -1.36
Rnf4-204ENSMUST00000182047 Krtap13-1Q8K198 168 aa6.57□□□□□ -1.36
Rnf4-204ENSMUST00000182047 Gm20538F6Z9R1 75 aa6.56□□□□□ -1.36
Rnf4-204ENSMUST00000182047 Ubr4A2AN08 5180 aa6.56□□□□□ -1.36
Rnf4-204ENSMUST00000182047 Hmcn2A2AJ76 5100 aa6.52□□□□□ -1.37
Rnf4-204ENSMUST00000182047 Krtap16-3Q8C1I6 86 aa6.49□□□□□ -1.37
Rnf4-204ENSMUST00000182047 ZanO88799 5376 aa6.46□□□□□ -1.38
Rnf4-204ENSMUST00000182047 Gm19426M0QWC7 77 aa6.46□□□□□ -1.38
Rnf4-204ENSMUST00000182047 Gm18596A0A1W2P860 280 aa6.42□□□□□ -1.38
Rnf4-204ENSMUST00000182047 Krtap19-1Q925H2 87 aa6.41□□□□□ -1.38
Rnf4-204ENSMUST00000182047 B930094E09RikQ8C4T2 136 aa6.4□□□□□ -1.39
Rnf4-204ENSMUST00000182047 Krtap19-3Q925H6 87 aa6.39□□□□□ -1.39
Rnf4-204ENSMUST00000182047 Krtap1-5A2A590 122 aa6.39□□□□□ -1.39
Rnf4-204ENSMUST00000182047 Fam229aB2KGE5 128 aa6.36□□□□□ -1.39
Rnf4-204ENSMUST00000182047 4932415D10RikA0A1W2P6U8 4986 aa6.36□□□□□ -1.39
Rnf4-204ENSMUST00000182047 BC029722A0A0N4SW31 51 aa6.34□□□□□ -1.39
Rnf4-204ENSMUST00000182047 Fat4Q2PZL6 4981 aa6.31□□□□□ -1.4
Rnf4-204ENSMUST00000182047 Krtap1-3A2A588 173 aa6.29□□□□□ -1.4
Rnf4-204ENSMUST00000182047 Gm19402J3QJV4 266 aa6.27□□□□□ -1.41
Rnf4-204ENSMUST00000182047 Ndufaf8A2AMZ4 74 aa6.26□□□□□ -1.41
Rnf4-204ENSMUST00000182047 Gm9789Q8BIG3 52 aa6.26□□□□□ -1.41
Rnf4-204ENSMUST00000182047 LorP18165 486 aa6.19□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Krtap7-1Q9D3I6 87 aa6.19□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Gm7735D3YX18 52 aa6.17□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Prm1P02319 51 aa6.17□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Spink7Q6IE32 76 aa6.17□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Gm19668J3QMD1 248 aa6.15□□□□□ -1.42
Rnf4-204ENSMUST00000182047 Rnf213E9Q555 5152 aaKnown RBP6.15□□□□□ -1.43
Rnf4-204ENSMUST00000182047 Prm2P07978 107 aa6.07□□□□□ -1.44
Rnf4-204ENSMUST00000182047 Krtap1-4Q3V2D6 188 aa6.05□□□□□ -1.44
Rnf4-204ENSMUST00000182047 Gm17402F6Z0L5 76 aa5.99□□□□□ -1.45
Rnf4-204ENSMUST00000182047 Lce1jD3YUU5 139 aa5.97□□□□□ -1.45
Rnf4-204ENSMUST00000182047 Sprr2a3Q4KL71 83 aa5.96□□□□□ -1.45
Rnf4-204ENSMUST00000182047 Sprr2a1Q9CQK8 83 aa5.96□□□□□ -1.45
Rnf4-204ENSMUST00000182047 Camk2n1Q6QWF9 78 aa5.88□□□□□ -1.47
Rnf4-204ENSMUST00000182047 Gm40193A0A1B0GT39 78 aa5.88□□□□□ -1.47
Rnf4-204ENSMUST00000182047 Krtap12-1Q9Z287 130 aa5.85□□□□□ -1.47
Rnf4-204ENSMUST00000182047 Krtap17-1A2A5X6 109 aa5.85□□□□□ -1.47
Rnf4-204ENSMUST00000182047 SspoQ8CG65 4998 aa5.84□□□□□ -1.47
Rnf4-204ENSMUST00000182047 Krtap19-9aF8WH65 55 aa5.77□□□□□ -1.49
Rnf4-204ENSMUST00000182047 Krtap19-2Q925I0 141 aa5.68□□□□□ -1.5
Rnf4-204ENSMUST00000182047 Gm9112A2AI92 75 aa5.67□□□□□ -1.5
Rnf4-204ENSMUST00000182047 Krtap9-5A2A5X3 358 aa5.66□□□□□ -1.5
Rnf4-204ENSMUST00000182047 Gm10061D3Z714 54 aa5.64□□□□□ -1.51
Rnf4-204ENSMUST00000182047 Lce1iQ9D6P5 149 aa5.58□□□□□ -1.52
Rnf4-204ENSMUST00000182047 Lce1a2Q9D1K4 149 aa5.53□□□□□ -1.52
Rnf4-204ENSMUST00000182047 Tnp1P10856 55 aa5.48□□□□□ -1.53
Rnf4-204ENSMUST00000182047 Muc5bE9Q5I3 4800 aa5.45□□□□□ -1.54
Rnf4-204ENSMUST00000182047 Gm6358A0A087WPH4 74 aa5.36□□□□□ -1.55
Rnf4-204ENSMUST00000182047 Gm11569B1AQB1 180 aa5.36□□□□□ -1.55
Rnf4-204ENSMUST00000182047 Krtap8-1O08633 61 aa5.31□□□□□ -1.56
Rnf4-204ENSMUST00000182047 Mdn1A2ANY6 5589 aaKnown RBP5.29□□□□□ -1.56
Rnf4-204ENSMUST00000182047 Mt2P02798 61 aa5.26□□□□□ -1.57
Rnf4-204ENSMUST00000182047 Krtap19-9bQ99NG9 58 aa5.26□□□□□ -1.57
Rnf4-204ENSMUST00000182047 Krtap4-1Q3UUY3 169 aa5.18□□□□□ -1.58
Rnf4-204ENSMUST00000182047 Krtap9-3Q3V2C1 136 aa5.18□□□□□ -1.58
Rnf4-204ENSMUST00000182047 Lce1hQ9D6R3 140 aa5.07□□□□□ -1.6
Rnf4-204ENSMUST00000182047 2310046K23RikA0A0A6YVW6 87 aa5.07□□□□□ -1.6
Rnf4-204ENSMUST00000182047 Krtap22-2J3QNX6 67 aa4.94□□□□□ -1.62
Rnf4-204ENSMUST00000182047 Krtap4-6Q3V4B7 195 aa4.92□□□□□ -1.62
Rnf4-204ENSMUST00000182047 Lce1dQ9D731 133 aa4.86□□□□□ -1.63
Rnf4-204ENSMUST00000182047 Lce1gQ9D195 139 aa4.85□□□□□ -1.63
Rnf4-204ENSMUST00000182047 Krtap4-2B1AQ85 167 aa4.84□□□□□ -1.63
Rnf4-204ENSMUST00000182047 Gm11555B1AQ89 175 aa4.84□□□□□ -1.63
Rnf4-204ENSMUST00000182047 Syne2Q6ZWQ0 6874 aaKnown RBP4.82□□□□□ -1.64
Rnf4-204ENSMUST00000182047 Gm11563B1AQ90 168 aa4.79□□□□□ -1.64
Rnf4-204ENSMUST00000182047 Krtap4-7Q9D732 168 aa4.79□□□□□ -1.64
Rnf4-204ENSMUST00000182047 Gm11596B1AQB0 205 aa4.73□□□□□ -1.65
Rnf4-204ENSMUST00000182047 A0A1Y7VJH8 109 aa4.72□□□□□ -1.65
Rnf4-204ENSMUST00000182047 Fsip2A2ARZ3 6995 aa4.71□□□□□ -1.66
Rnf4-204ENSMUST00000182047 Gm10272F7CZ33 110 aa4.69□□□□□ -1.66
Rnf4-204ENSMUST00000182047 Lce1eQ9D139 143 aa4.67□□□□□ -1.66
Rnf4-204ENSMUST00000182047 Gm11564A2A4L9 201 aa4.65□□□□□ -1.67
Rnf4-204ENSMUST00000182047 Gm11595B1AQA7 289 aa4.65□□□□□ -1.67
Rnf4-204ENSMUST00000182047 Krtap4-8B1AQA8 209 aa4.65□□□□□ -1.67
Rnf4-204ENSMUST00000182047 Mt4P47945 62 aa4.6□□□□□ -1.67
Rnf4-204ENSMUST00000182047 Krtap28-10A0A1Y7VP58 119 aa4.59□□□□□ -1.68
Rnf4-204ENSMUST00000182047 Sprr2gO70558 76 aa4.57□□□□□ -1.68
Rnf4-204ENSMUST00000182047 Krtap4-9B1AQA9 244 aa4.55□□□□□ -1.68
Rnf4-204ENSMUST00000182047 4933428G20RikQ9D3X4 101 aa4.55□□□□□ -1.68
Rnf4-204ENSMUST00000182047 Syne1Q6ZWR6 8799 aa4.55□□□□□ -1.68
Rnf4-204ENSMUST00000182047 Gm11938Q9D3H4 131 aa4.55□□□□□ -1.68
Rnf4-204ENSMUST00000182047 Gm38119A0A0A6YX29 146 aa4.51□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 117.1 ms