RNA–Protein interactions for RNA: ENSMUST00000169900.7

Scn9a-207, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,497 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-207ENSMUST00000169900 PcloQ9QYX7 5068 aa2.55□□□□□ -2
Scn9a-207ENSMUST00000169900 Dync1h1Q9JHU4 4644 aaKnown RBP2.53□□□□□ -2
Scn9a-207ENSMUST00000169900 Dnah2P0C6F1 4456 aa2.53□□□□□ -2
Scn9a-207ENSMUST00000169900 Gm6358A0A087WPH4 74 aa2.53□□□□□ -2
Scn9a-207ENSMUST00000169900 B930094E09RikQ8C4T2 136 aa2.53□□□□□ -2
Scn9a-207ENSMUST00000169900 Gm18596A0A1W2P860 280 aa2.52□□□□□ -2.01
Scn9a-207ENSMUST00000169900 2210017I01RikA0A0A6YVV1 95 aa2.52□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Vps13dB1ART2 4390 aa2.52□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Krtap19-5O08632 62 aa2.51□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Stard9Q80TF6 4561 aa2.51□□□□□ -2.01
Scn9a-207ENSMUST00000169900 PrkdcP97313 4128 aa2.5□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Dnah11E9Q7N9 4488 aa2.5□□□□□ -2.01
Scn9a-207ENSMUST00000169900 A0A1Y7VJ07 166 aa2.5□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Sprr2kO70562 68 aa2.5□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Gm10318A0A1W2P728 225 aa2.49□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Krtap4-1Q3UUY3 169 aa2.49□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Ubr4A2AN08 5180 aa2.48□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Dnhd1D3Z2X2 4750 aa2.48□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Dnah5Q8VHE6 4621 aa2.48□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Gm19402J3QJV4 266 aa2.47□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Fat1A0A1L1SQU7 4645 aa2.47□□□□□ -2.01
Scn9a-207ENSMUST00000169900 Gm17402F6Z0L5 76 aa2.46□□□□□ -2.02
Scn9a-207ENSMUST00000169900 2310079G19RikQ9D6L6 185 aa2.46□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Crct1Q6PAI5 102 aa2.45□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Dnah8Q91XQ0 4731 aa2.44□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Dnah7cA0A087WR13 4024 aa2.43□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Fras1Q80T14 4010 aa2.42□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Gm19668J3QMD1 248 aa2.41□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Kmt2cQ8BRH4 4903 aa2.41□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Dnah7aE9Q0T8 4024 aa2.4□□□□□ -2.02
Scn9a-207ENSMUST00000169900 Pkd1O08852 4293 aa2.4□□□□□ -2.02
Scn9a-207ENSMUST00000169900 SacsQ9JLC8 4582 aa2.4□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Krtap13-1Q8K198 168 aa2.39□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Hmcn2A2AJ76 5100 aa2.39□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Hectd4E9Q2E4 4418 aa2.39□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Gm11939A2A592 99 aa2.39□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Sprr2gO70558 76 aa2.37□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Herc1E9PZP8 4859 aa2.37□□□□□ -2.03
Scn9a-207ENSMUST00000169900 ApobE9Q414 4505 aa2.36□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Lrp1Q91ZX7 4545 aaKnown RBP2.35□□□□□ -2.03
Scn9a-207ENSMUST00000169900 Rnf213E9Q555 5152 aaKnown RBP2.34□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Fat2Q5F226 4351 aa2.32□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Fat3Q8BNA6 4555 aa2.32□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Ush2AQ2QI47 5193 aa2.32□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Gm11563B1AQ90 168 aa2.32□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Krtap4-7Q9D732 168 aa2.32□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Mycbp2Q7TPH6 4711 aa2.31□□□□□ -2.04
Scn9a-207ENSMUST00000169900 4932415D10RikA0A1W2P6U8 4986 aa2.31□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Pkhd1E9PZ36 4059 aa2.29□□□□□ -2.04
Scn9a-207ENSMUST00000169900 ZanO88799 5376 aa2.29□□□□□ -2.04
Scn9a-207ENSMUST00000169900 A030014E15RikA0A1Y7VJV2 120 aa2.28□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Krtap8-1O08633 61 aa2.28□□□□□ -2.04
Scn9a-207ENSMUST00000169900 Gm11555B1AQ89 175 aa2.27□□□□□ -2.05
Scn9a-207ENSMUST00000169900 Krtap3-1A2A591 98 aa2.26□□□□□ -2.05
Scn9a-207ENSMUST00000169900 Lrp2A2ARV4 4660 aa2.26□□□□□ -2.05
Scn9a-207ENSMUST00000169900 Vps13bQ80TY5 3993 aa2.24□□□□□ -2.05
Scn9a-207ENSMUST00000169900 LorP18165 486 aa2.24□□□□□ -2.05
Scn9a-207ENSMUST00000169900 Krtap19-9aF8WH65 55 aa2.21□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap3-2Q9D638 99 aa2.21□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap3-3Q9D7P0 99 aa2.21□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap1-5A2A590 122 aa2.2□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Pkhd1l1Q80ZA4 4249 aa2.2□□□□□ -2.06
Scn9a-207ENSMUST00000169900 2310046K23RikA0A0A6YVW6 87 aa2.2□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Lce1mQ9CR91 182 aa2.2□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Fat4Q2PZL6 4981 aa2.17□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap4-2B1AQ85 167 aa2.16□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap7-1Q9D3I6 87 aa2.16□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Krtap1-4Q3V2D6 188 aa2.16□□□□□ -2.06
Scn9a-207ENSMUST00000169900 Sprr2fO70557 76 aa2.13□□□□□ -2.07
Scn9a-207ENSMUST00000169900 Krtap12-1Q9Z287 130 aa2.11□□□□□ -2.07
Scn9a-207ENSMUST00000169900 Sprr2a3Q4KL71 83 aa2.11□□□□□ -2.07
Scn9a-207ENSMUST00000169900 Sprr2a1Q9CQK8 83 aa2.11□□□□□ -2.07
Scn9a-207ENSMUST00000169900 Krtap19-9bQ99NG9 58 aa2.1□□□□□ -2.07
Scn9a-207ENSMUST00000169900 A0A286YCP9 139 aa2.1□□□□□ -2.07
Scn9a-207ENSMUST00000169900 Prm1P02319 51 aa2.1□□□□□ -2.07
Scn9a-207ENSMUST00000169900 SspoQ8CG65 4998 aa2.06□□□□□ -2.08
Scn9a-207ENSMUST00000169900 Lce3cQ91V05 98 aa2.03□□□□□ -2.08
Scn9a-207ENSMUST00000169900 Lce3bQ9CQM7 98 aa2.03□□□□□ -2.08
Scn9a-207ENSMUST00000169900 Krtap9-5A2A5X3 358 aa2.01□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Sprr2iO70560 76 aa2□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Gm38119A0A0A6YX29 146 aa2□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Gm7735D3YX18 52 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Krtap19-3Q925H6 87 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Lce1jD3YUU5 139 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Lce1gQ9D195 139 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Lce1iQ9D6P5 149 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Lce1hQ9D6R3 140 aa1.99□□□□□ -2.09
Scn9a-207ENSMUST00000169900 Krtap31-2Q8CAY5 177 aa1.96□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Lce3eF8VQJ0 98 aa1.94□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Lce3fQ6PAI4 98 aa1.94□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Krtap16-3Q8C1I6 86 aa1.93□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Krtap19-1Q925H2 87 aa1.93□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Lce3dE9Q8V1 98 aa1.92□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Gm9789Q8BIG3 52 aa1.92□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Krtap22-2J3QNX6 67 aa1.91□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Sprr2eO70556 76 aa1.91□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Gm10100J3QK64 120 aa1.91□□□□□ -2.1
Scn9a-207ENSMUST00000169900 Gm10272F7CZ33 110 aa1.88□□□□□ -2.11
Scn9a-207ENSMUST00000169900 Krtap17-1A2A5X6 109 aa1.88□□□□□ -2.11
Scn9a-207ENSMUST00000169900 Lce3aQ497I5 98 aa1.88□□□□□ -2.11
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms