RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Lrp1Q91ZX7 4545 aaKnown RBP6.21□□□□□ -1.42
Ebf3-203ENSMUST00000168203 B930094E09RikQ8C4T2 136 aa6.2□□□□□ -1.42
Ebf3-203ENSMUST00000168203 Ryr2E9Q401 4966 aaKnown RBP6.19□□□□□ -1.42
Ebf3-203ENSMUST00000168203 2310057N15RikQ9D6T8 200 aa6.17□□□□□ -1.42
Ebf3-203ENSMUST00000168203 Fat3Q8BNA6 4555 aa6.13□□□□□ -1.43
Ebf3-203ENSMUST00000168203 Gm17416Q30KP4 66 aa6.13□□□□□ -1.43
Ebf3-203ENSMUST00000168203 Pkhd1l1Q80ZA4 4249 aa6.1□□□□□ -1.43
Ebf3-203ENSMUST00000168203 Ryr1E9PZQ0 5035 aa6.08□□□□□ -1.44
Ebf3-203ENSMUST00000168203 Dnah8Q91XQ0 4731 aa6.07□□□□□ -1.44
Ebf3-203ENSMUST00000168203 Kmt2cQ8BRH4 4903 aa6.05□□□□□ -1.44
Ebf3-203ENSMUST00000168203 Vps13bQ80TY5 3993 aa6.03□□□□□ -1.44
Ebf3-203ENSMUST00000168203 2210017I01RikA0A0A6YVV1 95 aa5.99□□□□□ -1.45
Ebf3-203ENSMUST00000168203 Sec61bQ9CQS8 96 aaKnown RBP5.98□□□□□ -1.45
Ebf3-203ENSMUST00000168203 Gm40193A0A1B0GT39 78 aa5.97□□□□□ -1.45
Ebf3-203ENSMUST00000168203 Mycbp2Q7TPH6 4711 aa5.96□□□□□ -1.46
Ebf3-203ENSMUST00000168203 Krtap3-1A2A591 98 aa5.95□□□□□ -1.46
Ebf3-203ENSMUST00000168203 Abca13Q5SSE9 5034 aa5.94□□□□□ -1.46
Ebf3-203ENSMUST00000168203 Gm10318A0A1W2P728 225 aa5.92□□□□□ -1.46
Ebf3-203ENSMUST00000168203 Gm19668J3QMD1 248 aa5.9□□□□□ -1.46
Ebf3-203ENSMUST00000168203 Kiaa1109A2AAE1 5005 aa5.87□□□□□ -1.47
Ebf3-203ENSMUST00000168203 Krtap7-1Q9D3I6 87 aa5.86□□□□□ -1.47
Ebf3-203ENSMUST00000168203 Herc2Q4U2R1 4836 aa5.85□□□□□ -1.47
Ebf3-203ENSMUST00000168203 Krtap13-1Q8K198 168 aa5.81□□□□□ -1.48
Ebf3-203ENSMUST00000168203 Dnhd1D3Z2X2 4750 aa5.79□□□□□ -1.48
Ebf3-203ENSMUST00000168203 Birc6O88738 4882 aa5.74□□□□□ -1.49
Ebf3-203ENSMUST00000168203 Tnp1P10856 55 aa5.72□□□□□ -1.49
Ebf3-203ENSMUST00000168203 Crct1Q6PAI5 102 aa5.71□□□□□ -1.5
Ebf3-203ENSMUST00000168203 Lrp2A2ARV4 4660 aa5.7□□□□□ -1.5
Ebf3-203ENSMUST00000168203 Gm19402J3QJV4 266 aa5.69□□□□□ -1.5
Ebf3-203ENSMUST00000168203 HydinQ80W93 5154 aa5.69□□□□□ -1.5
Ebf3-203ENSMUST00000168203 Krtap1-5A2A590 122 aa5.64□□□□□ -1.51
Ebf3-203ENSMUST00000168203 Gm17402F6Z0L5 76 aa5.64□□□□□ -1.51
Ebf3-203ENSMUST00000168203 Krtap16-3Q8C1I6 86 aa5.49□□□□□ -1.53
Ebf3-203ENSMUST00000168203 Sprr2a3Q4KL71 83 aa5.42□□□□□ -1.54
Ebf3-203ENSMUST00000168203 Sprr2a1Q9CQK8 83 aa5.42□□□□□ -1.54
Ebf3-203ENSMUST00000168203 Krtap19-1Q925H2 87 aa5.42□□□□□ -1.54
Ebf3-203ENSMUST00000168203 PcloQ9QYX7 5068 aa5.41□□□□□ -1.54
Ebf3-203ENSMUST00000168203 Krtap19-3Q925H6 87 aa5.39□□□□□ -1.55
Ebf3-203ENSMUST00000168203 Lce1mQ9CR91 182 aa5.34□□□□□ -1.56
Ebf3-203ENSMUST00000168203 Krtap1-4Q3V2D6 188 aa5.32□□□□□ -1.56
Ebf3-203ENSMUST00000168203 Herc1E9PZP8 4859 aa5.26□□□□□ -1.57
Ebf3-203ENSMUST00000168203 Krtap1-3A2A588 173 aa5.15□□□□□ -1.58
Ebf3-203ENSMUST00000168203 LorP18165 486 aa5.15□□□□□ -1.59
Ebf3-203ENSMUST00000168203 Gm18596A0A1W2P860 280 aa5.13□□□□□ -1.59
Ebf3-203ENSMUST00000168203 Ush2AQ2QI47 5193 aa5.1□□□□□ -1.59
Ebf3-203ENSMUST00000168203 Krtap19-9aF8WH65 55 aa5.1□□□□□ -1.59
Ebf3-203ENSMUST00000168203 Krtap12-1Q9Z287 130 aa5.1□□□□□ -1.59
Ebf3-203ENSMUST00000168203 ZanO88799 5376 aa5.1□□□□□ -1.59
Ebf3-203ENSMUST00000168203 Ubr4A2AN08 5180 aa5.07□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Gm9789Q8BIG3 52 aa5.06□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Hmcn2A2AJ76 5100 aa5.05□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Krtap4-1Q3UUY3 169 aa5.03□□□□□ -1.6
Ebf3-203ENSMUST00000168203 4932415D10RikA0A1W2P6U8 4986 aa5.03□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Prm1P02319 51 aa5.03□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Lce1jD3YUU5 139 aa5.03□□□□□ -1.6
Ebf3-203ENSMUST00000168203 Gm7735D3YX18 52 aa4.98□□□□□ -1.61
Ebf3-203ENSMUST00000168203 Fat4Q2PZL6 4981 aa4.92□□□□□ -1.62
Ebf3-203ENSMUST00000168203 4933428G20RikQ9D3X4 101 aa4.88□□□□□ -1.63
Ebf3-203ENSMUST00000168203 Rnf213E9Q555 5152 aaKnown RBP4.85□□□□□ -1.63
Ebf3-203ENSMUST00000168203 Krtap9-5A2A5X3 358 aa4.8□□□□□ -1.64
Ebf3-203ENSMUST00000168203 Krtap19-2Q925I0 141 aa4.8□□□□□ -1.64
Ebf3-203ENSMUST00000168203 Krtap8-1O08633 61 aa4.79□□□□□ -1.64
Ebf3-203ENSMUST00000168203 Krtap19-9bQ99NG9 58 aa4.79□□□□□ -1.64
Ebf3-203ENSMUST00000168203 Krtap17-1A2A5X6 109 aa4.73□□□□□ -1.65
Ebf3-203ENSMUST00000168203 Lce1iQ9D6P5 149 aa4.71□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Syne1Q6ZWR6 8799 aa4.68□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Gm6358A0A087WPH4 74 aa4.68□□□□□ -1.66
Ebf3-203ENSMUST00000168203 2310046K23RikA0A0A6YVW6 87 aa4.67□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Gm11555B1AQ89 175 aa4.66□□□□□ -1.66
Ebf3-203ENSMUST00000168203 SspoQ8CG65 4998 aa4.66□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Lce1a2Q9D1K4 149 aa4.66□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Gm11563B1AQ90 168 aa4.65□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Krtap4-7Q9D732 168 aa4.65□□□□□ -1.66
Ebf3-203ENSMUST00000168203 Gm10061D3Z714 54 aa4.6□□□□□ -1.67
Ebf3-203ENSMUST00000168203 Mt2P02798 61 aa4.52□□□□□ -1.69
Ebf3-203ENSMUST00000168203 Krtap9-3Q3V2C1 136 aa4.5□□□□□ -1.69
Ebf3-203ENSMUST00000168203 Muc16A0A140LJ72 8478 aa4.45□□□□□ -1.7
Ebf3-203ENSMUST00000168203 Muc5bE9Q5I3 4800 aa4.43□□□□□ -1.7
Ebf3-203ENSMUST00000168203 Mdn1A2ANY6 5589 aaKnown RBP4.42□□□□□ -1.7
Ebf3-203ENSMUST00000168203 Gm10272F7CZ33 110 aa4.39□□□□□ -1.71
Ebf3-203ENSMUST00000168203 Lce1hQ9D6R3 140 aa4.39□□□□□ -1.71
Ebf3-203ENSMUST00000168203 Gm10100J3QK64 120 aa4.39□□□□□ -1.71
Ebf3-203ENSMUST00000168203 Gm11569B1AQB1 180 aa4.31□□□□□ -1.72
Ebf3-203ENSMUST00000168203 Lce1dQ9D731 133 aa4.3□□□□□ -1.72
Ebf3-203ENSMUST00000168203 Krtap22-2J3QNX6 67 aa4.3□□□□□ -1.72
Ebf3-203ENSMUST00000168203 Lce3bQ9CQM7 98 aa4.24□□□□□ -1.73
Ebf3-203ENSMUST00000168203 Gm10142J3KMP7 120 aa4.23□□□□□ -1.73
Ebf3-203ENSMUST00000168203 A0A1Y7VJH8 109 aa4.22□□□□□ -1.73
Ebf3-203ENSMUST00000168203 Sprr2gO70558 76 aa4.19□□□□□ -1.74
Ebf3-203ENSMUST00000168203 Krtap28-10A0A1Y7VP58 119 aa4.15□□□□□ -1.74
Ebf3-203ENSMUST00000168203 Lce3cQ91V05 98 aa4.15□□□□□ -1.75
Ebf3-203ENSMUST00000168203 Krtap31-1Q9D644 177 aa4.12□□□□□ -1.75
Ebf3-203ENSMUST00000168203 Krtap4-2B1AQ85 167 aa4.12□□□□□ -1.75
Ebf3-203ENSMUST00000168203 Gm11938Q9D3H4 131 aa4.11□□□□□ -1.75
Ebf3-203ENSMUST00000168203 Lce3dE9Q8V1 98 aa4.09□□□□□ -1.75
Ebf3-203ENSMUST00000168203 Lce1eQ9D139 143 aa4.08□□□□□ -1.76
Ebf3-203ENSMUST00000168203 Sprr2dO70555 85 aa3.99□□□□□ -1.77
Ebf3-203ENSMUST00000168203 A0A1Y7VLE6 161 aa3.98□□□□□ -1.77
Ebf3-203ENSMUST00000168203 Lce3eF8VQJ0 98 aa3.98□□□□□ -1.77
Ebf3-203ENSMUST00000168203 Lce3fQ6PAI4 98 aa3.98□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms