RNA–Protein interactions for RNA: ENSMUST00000147044.3

Trim3-205, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-205ENSMUST00000147044 D6Ertd527eA0A0N4SWI3 464 aa8□□□□□ -1.13
Trim3-205ENSMUST00000147044 Gm5767A0A0J9YTU8 78 aa7.97□□□□□ -1.13
Trim3-205ENSMUST00000147044 Prm2P07978 107 aa7.96□□□□□ -1.13
Trim3-205ENSMUST00000147044 Gm20537G3UYK7 97 aa7.91□□□□□ -1.14
Trim3-205ENSMUST00000147044 2310057N15RikQ9D6T8 200 aa7.85□□□□□ -1.15
Trim3-205ENSMUST00000147044 Gm10318A0A1W2P728 225 aa7.82□□□□□ -1.16
Trim3-205ENSMUST00000147044 Rnase13Q5GAM7 153 aa7.77□□□□□ -1.17
Trim3-205ENSMUST00000147044 Cox6b2Q80ZN9 88 aa7.77□□□□□ -1.17
Trim3-205ENSMUST00000147044 Crct1Q6PAI5 102 aa7.74□□□□□ -1.17
Trim3-205ENSMUST00000147044 Ubr4A2AN08 5180 aa7.72□□□□□ -1.17
Trim3-205ENSMUST00000147044 Rpl37Q9D823 97 aa7.71□□□□□ -1.18
Trim3-205ENSMUST00000147044 Ndufaf8A2AMZ4 74 aa7.65□□□□□ -1.18
Trim3-205ENSMUST00000147044 Gm17606F6ZL36 78 aa7.59□□□□□ -1.19
Trim3-205ENSMUST00000147044 Gm10382Q3V0T5 144 aa7.58□□□□□ -1.2
Trim3-205ENSMUST00000147044 Ush2AQ2QI47 5193 aa7.51□□□□□ -1.21
Trim3-205ENSMUST00000147044 Gm9955Q8CEJ8 102 aa7.5□□□□□ -1.21
Trim3-205ENSMUST00000147044 Gm17416Q30KP4 66 aa7.47□□□□□ -1.21
Trim3-205ENSMUST00000147044 ZanO88799 5376 aa7.45□□□□□ -1.22
Trim3-205ENSMUST00000147044 Fat4Q2PZL6 4981 aa7.44□□□□□ -1.22
Trim3-205ENSMUST00000147044 Lce1mQ9CR91 182 aa7.4□□□□□ -1.23
Trim3-205ENSMUST00000147044 Hmcn2A2AJ76 5100 aa7.37□□□□□ -1.23
Trim3-205ENSMUST00000147044 Krtap3-1A2A591 98 aa7.37□□□□□ -1.23
Trim3-205ENSMUST00000147044 Krtap13-1Q8K198 168 aa7.36□□□□□ -1.23
Trim3-205ENSMUST00000147044 Gm21887J3QQ04 176 aa7.34□□□□□ -1.23
Trim3-205ENSMUST00000147044 2210017I01RikA0A0A6YVV1 95 aa7.32□□□□□ -1.24
Trim3-205ENSMUST00000147044 Gm18596A0A1W2P860 280 aa7.29□□□□□ -1.24
Trim3-205ENSMUST00000147044 Sec61bQ9CQS8 96 aaKnown RBP7.27□□□□□ -1.25
Trim3-205ENSMUST00000147044 Krtap16-3Q8C1I6 86 aa7.26□□□□□ -1.25
Trim3-205ENSMUST00000147044 4932415D10RikA0A1W2P6U8 4986 aa7.25□□□□□ -1.25
Trim3-205ENSMUST00000147044 Rnf213E9Q555 5152 aaKnown RBP7.23□□□□□ -1.25
Trim3-205ENSMUST00000147044 Gm9112A2AI92 75 aa7.15□□□□□ -1.26
Trim3-205ENSMUST00000147044 Krtap19-3Q925H6 87 aa7.14□□□□□ -1.27
Trim3-205ENSMUST00000147044 BC029722A0A0N4SW31 51 aa7.12□□□□□ -1.27
Trim3-205ENSMUST00000147044 Krtap19-1Q925H2 87 aa7.11□□□□□ -1.27
Trim3-205ENSMUST00000147044 LorP18165 486 aa7.1□□□□□ -1.27
Trim3-205ENSMUST00000147044 Krtap7-1Q9D3I6 87 aa7.07□□□□□ -1.28
Trim3-205ENSMUST00000147044 Fam229aB2KGE5 128 aa7.05□□□□□ -1.28
Trim3-205ENSMUST00000147044 Krtap1-3A2A588 173 aa7.04□□□□□ -1.28
Trim3-205ENSMUST00000147044 Gm19426M0QWC7 77 aa7.04□□□□□ -1.28
Trim3-205ENSMUST00000147044 Gm19668J3QMD1 248 aa7.04□□□□□ -1.28
Trim3-205ENSMUST00000147044 B930094E09RikQ8C4T2 136 aa7□□□□□ -1.29
Trim3-205ENSMUST00000147044 Krtap1-5A2A590 122 aa6.99□□□□□ -1.29
Trim3-205ENSMUST00000147044 Spink7Q6IE32 76 aa6.97□□□□□ -1.29
Trim3-205ENSMUST00000147044 Gm19402J3QJV4 266 aa6.95□□□□□ -1.3
Trim3-205ENSMUST00000147044 Gm9789Q8BIG3 52 aa6.86□□□□□ -1.31
Trim3-205ENSMUST00000147044 Krtap17-1A2A5X6 109 aa6.83□□□□□ -1.32
Trim3-205ENSMUST00000147044 Gm17402F6Z0L5 76 aa6.83□□□□□ -1.32
Trim3-205ENSMUST00000147044 Gm7735D3YX18 52 aa6.79□□□□□ -1.32
Trim3-205ENSMUST00000147044 Lce1jD3YUU5 139 aa6.78□□□□□ -1.32
Trim3-205ENSMUST00000147044 Gm40193A0A1B0GT39 78 aa6.73□□□□□ -1.33
Trim3-205ENSMUST00000147044 Krtap1-4Q3V2D6 188 aa6.72□□□□□ -1.33
Trim3-205ENSMUST00000147044 Prm1P02319 51 aa6.7□□□□□ -1.34
Trim3-205ENSMUST00000147044 Sprr2a3Q4KL71 83 aa6.69□□□□□ -1.34
Trim3-205ENSMUST00000147044 Sprr2a1Q9CQK8 83 aa6.69□□□□□ -1.34
Trim3-205ENSMUST00000147044 Krtap12-1Q9Z287 130 aa6.51□□□□□ -1.37
Trim3-205ENSMUST00000147044 Camk2n1Q6QWF9 78 aa6.47□□□□□ -1.37
Trim3-205ENSMUST00000147044 Krtap9-5A2A5X3 358 aa6.39□□□□□ -1.39
Trim3-205ENSMUST00000147044 SspoQ8CG65 4998 aa6.39□□□□□ -1.39
Trim3-205ENSMUST00000147044 Krtap19-9aF8WH65 55 aa6.38□□□□□ -1.39
Trim3-205ENSMUST00000147044 Mdn1A2ANY6 5589 aaKnown RBP6.36□□□□□ -1.39
Trim3-205ENSMUST00000147044 Krtap19-2Q925I0 141 aa6.34□□□□□ -1.39
Trim3-205ENSMUST00000147044 Lce1iQ9D6P5 149 aa6.3□□□□□ -1.4
Trim3-205ENSMUST00000147044 Gm10061D3Z714 54 aa6.28□□□□□ -1.4
Trim3-205ENSMUST00000147044 Lce1a2Q9D1K4 149 aa6.26□□□□□ -1.41
Trim3-205ENSMUST00000147044 Muc5bE9Q5I3 4800 aa6.04□□□□□ -1.44
Trim3-205ENSMUST00000147044 Gm11569B1AQB1 180 aa6.03□□□□□ -1.44
Trim3-205ENSMUST00000147044 Tnp1P10856 55 aa6□□□□□ -1.45
Trim3-205ENSMUST00000147044 Gm6358A0A087WPH4 74 aa6□□□□□ -1.45
Trim3-205ENSMUST00000147044 Krtap9-3Q3V2C1 136 aa5.94□□□□□ -1.46
Trim3-205ENSMUST00000147044 Mt2P02798 61 aa5.91□□□□□ -1.46
Trim3-205ENSMUST00000147044 Krtap8-1O08633 61 aa5.9□□□□□ -1.47
Trim3-205ENSMUST00000147044 Krtap19-9bQ99NG9 58 aa5.85□□□□□ -1.47
Trim3-205ENSMUST00000147044 Lce1hQ9D6R3 140 aa5.77□□□□□ -1.49
Trim3-205ENSMUST00000147044 Fsip2A2ARZ3 6995 aa5.72□□□□□ -1.49
Trim3-205ENSMUST00000147044 Krtap4-6Q3V4B7 195 aa5.64□□□□□ -1.51
Trim3-205ENSMUST00000147044 2310046K23RikA0A0A6YVW6 87 aa5.61□□□□□ -1.51
Trim3-205ENSMUST00000147044 Syne2Q6ZWQ0 6874 aaKnown RBP5.52□□□□□ -1.53
Trim3-205ENSMUST00000147044 Krtap22-2J3QNX6 67 aa5.5□□□□□ -1.53
Trim3-205ENSMUST00000147044 Krtap4-2B1AQ85 167 aa5.49□□□□□ -1.53
Trim3-205ENSMUST00000147044 Krtap4-1Q3UUY3 169 aa5.47□□□□□ -1.53
Trim3-205ENSMUST00000147044 Lce1gQ9D195 139 aa5.43□□□□□ -1.54
Trim3-205ENSMUST00000147044 Gm10272F7CZ33 110 aa5.37□□□□□ -1.55
Trim3-205ENSMUST00000147044 Gm11596B1AQB0 205 aa5.34□□□□□ -1.55
Trim3-205ENSMUST00000147044 Lce1dQ9D731 133 aa5.32□□□□□ -1.56
Trim3-205ENSMUST00000147044 Syne1Q6ZWR6 8799 aa5.31□□□□□ -1.56
Trim3-205ENSMUST00000147044 Mt4P47945 62 aa5.3□□□□□ -1.56
Trim3-205ENSMUST00000147044 Gm11555B1AQ89 175 aa5.29□□□□□ -1.56
Trim3-205ENSMUST00000147044 Gm11564A2A4L9 201 aa5.27□□□□□ -1.57
Trim3-205ENSMUST00000147044 Gm11563B1AQ90 168 aa5.27□□□□□ -1.57
Trim3-205ENSMUST00000147044 Gm11595B1AQA7 289 aa5.27□□□□□ -1.57
Trim3-205ENSMUST00000147044 Krtap4-8B1AQA8 209 aa5.27□□□□□ -1.57
Trim3-205ENSMUST00000147044 Gm38119A0A0A6YX29 146 aa5.26□□□□□ -1.57
Trim3-205ENSMUST00000147044 Krtap4-9B1AQA9 244 aa5.2□□□□□ -1.58
Trim3-205ENSMUST00000147044 4933428G20RikQ9D3X4 101 aa5.11□□□□□ -1.59
Trim3-205ENSMUST00000147044 Krtap4-13Q9D7P3 165 aa5.08□□□□□ -1.6
Trim3-205ENSMUST00000147044 Lce1eQ9D139 143 aa5.07□□□□□ -1.6
Trim3-205ENSMUST00000147044 Sprr2gO70558 76 aa5.04□□□□□ -1.6
Trim3-205ENSMUST00000147044 Krtap31-1Q9D644 177 aa5.03□□□□□ -1.6
Trim3-205ENSMUST00000147044 Gm11938Q9D3H4 131 aa5.01□□□□□ -1.61
Trim3-205ENSMUST00000147044 Lce1cQ9D1C5 147 aa4.99□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms