RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Krtap19-5O08632 62 aa5.67□□□□□ -1.5
Ndc1-204ENSMUST00000139560 Dnah2P0C6F1 4456 aa5.66□□□□□ -1.5
Ndc1-204ENSMUST00000139560 Lrp1bQ9JI18 4599 aa5.61□□□□□ -1.51
Ndc1-204ENSMUST00000139560 Vps13bQ80TY5 3993 aa5.57□□□□□ -1.52
Ndc1-204ENSMUST00000139560 ApobE9Q414 4505 aa5.57□□□□□ -1.52
Ndc1-204ENSMUST00000139560 Krtap13-1Q8K198 168 aa5.53□□□□□ -1.52
Ndc1-204ENSMUST00000139560 Pkhd1l1Q80ZA4 4249 aa5.5□□□□□ -1.53
Ndc1-204ENSMUST00000139560 Krtap3-1A2A591 98 aa5.48□□□□□ -1.53
Ndc1-204ENSMUST00000139560 Fat2Q5F226 4351 aa5.46□□□□□ -1.54
Ndc1-204ENSMUST00000139560 Fat1A0A1L1SQU7 4645 aa5.44□□□□□ -1.54
Ndc1-204ENSMUST00000139560 Ryr3A2AGL3 4863 aa5.39□□□□□ -1.55
Ndc1-204ENSMUST00000139560 Gm17402F6Z0L5 76 aa5.37□□□□□ -1.55
Ndc1-204ENSMUST00000139560 Gm19668J3QMD1 248 aa5.35□□□□□ -1.55
Ndc1-204ENSMUST00000139560 SacsQ9JLC8 4582 aa5.34□□□□□ -1.55
Ndc1-204ENSMUST00000139560 Lrp1Q91ZX7 4545 aaKnown RBP5.33□□□□□ -1.56
Ndc1-204ENSMUST00000139560 Kmt2cQ8BRH4 4903 aa5.33□□□□□ -1.56
Ndc1-204ENSMUST00000139560 Ryr1E9PZQ0 5035 aa5.31□□□□□ -1.56
Ndc1-204ENSMUST00000139560 Mycbp2Q7TPH6 4711 aa5.27□□□□□ -1.57
Ndc1-204ENSMUST00000139560 Abca13Q5SSE9 5034 aa5.23□□□□□ -1.57
Ndc1-204ENSMUST00000139560 Dync1h1Q9JHU4 4644 aaKnown RBP5.21□□□□□ -1.57
Ndc1-204ENSMUST00000139560 Krtap7-1Q9D3I6 87 aa5.21□□□□□ -1.58
Ndc1-204ENSMUST00000139560 HydinQ80W93 5154 aa5.2□□□□□ -1.58
Ndc1-204ENSMUST00000139560 Gm19402J3QJV4 266 aa5.17□□□□□ -1.58
Ndc1-204ENSMUST00000139560 Fat3Q8BNA6 4555 aa5.13□□□□□ -1.59
Ndc1-204ENSMUST00000139560 Ryr2E9Q401 4966 aaKnown RBP5.07□□□□□ -1.6
Ndc1-204ENSMUST00000139560 LorP18165 486 aa5.06□□□□□ -1.6
Ndc1-204ENSMUST00000139560 Dnah8Q91XQ0 4731 aa5.03□□□□□ -1.6
Ndc1-204ENSMUST00000139560 Gm18596A0A1W2P860 280 aa5.03□□□□□ -1.6
Ndc1-204ENSMUST00000139560 Sprr2a3Q4KL71 83 aa4.99□□□□□ -1.61
Ndc1-204ENSMUST00000139560 Sprr2a1Q9CQK8 83 aa4.99□□□□□ -1.61
Ndc1-204ENSMUST00000139560 4933428G20RikQ9D3X4 101 aa4.98□□□□□ -1.61
Ndc1-204ENSMUST00000139560 Gm6358A0A087WPH4 74 aa4.98□□□□□ -1.61
Ndc1-204ENSMUST00000139560 Lrp2A2ARV4 4660 aa4.95□□□□□ -1.62
Ndc1-204ENSMUST00000139560 Krtap1-5A2A590 122 aa4.95□□□□□ -1.62
Ndc1-204ENSMUST00000139560 PcloQ9QYX7 5068 aa4.92□□□□□ -1.62
Ndc1-204ENSMUST00000139560 Krtap1-4Q3V2D6 188 aa4.88□□□□□ -1.63
Ndc1-204ENSMUST00000139560 Krtap19-9aF8WH65 55 aa4.87□□□□□ -1.63
Ndc1-204ENSMUST00000139560 Kiaa1109A2AAE1 5005 aa4.84□□□□□ -1.63
Ndc1-204ENSMUST00000139560 Krtap8-1O08633 61 aa4.79□□□□□ -1.64
Ndc1-204ENSMUST00000139560 Syne1Q6ZWR6 8799 aa4.78□□□□□ -1.64
Ndc1-204ENSMUST00000139560 Krtap12-1Q9Z287 130 aa4.77□□□□□ -1.65
Ndc1-204ENSMUST00000139560 Dnhd1D3Z2X2 4750 aa4.76□□□□□ -1.65
Ndc1-204ENSMUST00000139560 Herc2Q4U2R1 4836 aa4.75□□□□□ -1.65
Ndc1-204ENSMUST00000139560 Sprr2kO70562 68 aa4.7□□□□□ -1.66
Ndc1-204ENSMUST00000139560 Krtap19-9bQ99NG9 58 aa4.67□□□□□ -1.66
Ndc1-204ENSMUST00000139560 Birc6O88738 4882 aa4.67□□□□□ -1.66
Ndc1-204ENSMUST00000139560 Lce1mQ9CR91 182 aa4.65□□□□□ -1.67
Ndc1-204ENSMUST00000139560 Mdn1A2ANY6 5589 aaKnown RBP4.61□□□□□ -1.67
Ndc1-204ENSMUST00000139560 Muc16A0A140LJ72 8478 aa4.59□□□□□ -1.67
Ndc1-204ENSMUST00000139560 Krtap16-3Q8C1I6 86 aa4.59□□□□□ -1.68
Ndc1-204ENSMUST00000139560 Ubr4A2AN08 5180 aa4.58□□□□□ -1.68
Ndc1-204ENSMUST00000139560 Krtap19-3Q925H6 87 aa4.57□□□□□ -1.68
Ndc1-204ENSMUST00000139560 Herc1E9PZP8 4859 aa4.54□□□□□ -1.68
Ndc1-204ENSMUST00000139560 Krtap9-5A2A5X3 358 aa4.52□□□□□ -1.69
Ndc1-204ENSMUST00000139560 Krtap19-1Q925H2 87 aa4.47□□□□□ -1.69
Ndc1-204ENSMUST00000139560 Fat4Q2PZL6 4981 aa4.44□□□□□ -1.7
Ndc1-204ENSMUST00000139560 ZanO88799 5376 aa4.41□□□□□ -1.7
Ndc1-204ENSMUST00000139560 Sprr2gO70558 76 aa4.37□□□□□ -1.71
Ndc1-204ENSMUST00000139560 4932415D10RikA0A1W2P6U8 4986 aa4.36□□□□□ -1.71
Ndc1-204ENSMUST00000139560 Lce1jD3YUU5 139 aa4.35□□□□□ -1.71
Ndc1-204ENSMUST00000139560 Prm1P02319 51 aa4.34□□□□□ -1.71
Ndc1-204ENSMUST00000139560 Gm10272F7CZ33 110 aa4.34□□□□□ -1.72
Ndc1-204ENSMUST00000139560 Gm10100J3QK64 120 aa4.33□□□□□ -1.72
Ndc1-204ENSMUST00000139560 Hmcn2A2AJ76 5100 aa4.31□□□□□ -1.72
Ndc1-204ENSMUST00000139560 Mt2P02798 61 aa4.28□□□□□ -1.72
Ndc1-204ENSMUST00000139560 Ush2AQ2QI47 5193 aa4.28□□□□□ -1.72
Ndc1-204ENSMUST00000139560 Gm7735D3YX18 52 aa4.27□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Krtap1-3A2A588 173 aa4.26□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Lce3bQ9CQM7 98 aa4.26□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Krtap19-2Q925I0 141 aa4.24□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Krtap22-2J3QNX6 67 aa4.22□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Lce3cQ91V05 98 aa4.22□□□□□ -1.73
Ndc1-204ENSMUST00000139560 Rnf213E9Q555 5152 aaKnown RBP4.21□□□□□ -1.74
Ndc1-204ENSMUST00000139560 2310046K23RikA0A0A6YVW6 87 aa4.2□□□□□ -1.74
Ndc1-204ENSMUST00000139560 Gm38119A0A0A6YX29 146 aa4.19□□□□□ -1.74
Ndc1-204ENSMUST00000139560 Gm10142J3KMP7 120 aa4.16□□□□□ -1.74
Ndc1-204ENSMUST00000139560 Gm9789Q8BIG3 52 aa4.12□□□□□ -1.75
Ndc1-204ENSMUST00000139560 Lce3eF8VQJ0 98 aa4.07□□□□□ -1.76
Ndc1-204ENSMUST00000139560 Lce3fQ6PAI4 98 aa4.07□□□□□ -1.76
Ndc1-204ENSMUST00000139560 Gm10061D3Z714 54 aa4.05□□□□□ -1.76
Ndc1-204ENSMUST00000139560 Lce3dE9Q8V1 98 aa4□□□□□ -1.77
Ndc1-204ENSMUST00000139560 Krtap17-1A2A5X6 109 aa3.99□□□□□ -1.77
Ndc1-204ENSMUST00000139560 Gm11569B1AQB1 180 aa3.98□□□□□ -1.77
Ndc1-204ENSMUST00000139560 Lce1gQ9D195 139 aa3.95□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Lce1iQ9D6P5 149 aa3.95□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Lce1hQ9D6R3 140 aa3.95□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Krtap9-3Q3V2C1 136 aa3.95□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Lce3aQ497I5 98 aa3.93□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Fsip2A2ARZ3 6995 aa3.93□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Lce1a2Q9D1K4 149 aa3.92□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Sprr2iO70560 76 aa3.91□□□□□ -1.78
Ndc1-204ENSMUST00000139560 Lce1bQ9D149 137 aa3.9□□□□□ -1.79
Ndc1-204ENSMUST00000139560 Lce1fB9EJP6 147 aa3.89□□□□□ -1.79
Ndc1-204ENSMUST00000139560 Lce1cQ9D1C5 147 aa3.89□□□□□ -1.79
Ndc1-204ENSMUST00000139560 Lce1lQ9D1G7 135 aa3.89□□□□□ -1.79
Ndc1-204ENSMUST00000139560 Lce1dQ9D731 133 aa3.89□□□□□ -1.79
Ndc1-204ENSMUST00000139560 Mt4P47945 62 aa3.84□□□□□ -1.8
Ndc1-204ENSMUST00000139560 Krtap4-6Q3V4B7 195 aa3.82□□□□□ -1.8
Ndc1-204ENSMUST00000139560 SspoQ8CG65 4998 aa3.81□□□□□ -1.8
Ndc1-204ENSMUST00000139560 Macf1Q9QXZ0 7354 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 115.6 ms