RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Vps13bQ80TY5 3993 aa7.56□□□□□ -1.2
Syn1-202ENSMUST00000115345 Gm40193A0A1B0GT39 78 aa7.54□□□□□ -1.2
Syn1-202ENSMUST00000115345 Dnhd1D3Z2X2 4750 aa7.54□□□□□ -1.2
Syn1-202ENSMUST00000115345 Gm18596A0A1W2P860 280 aa7.53□□□□□ -1.2
Syn1-202ENSMUST00000115345 ApobE9Q414 4505 aa7.51□□□□□ -1.21
Syn1-202ENSMUST00000115345 Pkhd1l1Q80ZA4 4249 aa7.47□□□□□ -1.21
Syn1-202ENSMUST00000115345 HydinQ80W93 5154 aa7.47□□□□□ -1.21
Syn1-202ENSMUST00000115345 Mycbp2Q7TPH6 4711 aa7.46□□□□□ -1.22
Syn1-202ENSMUST00000115345 Adm2Q7TNK8 150 aa7.44□□□□□ -1.22
Syn1-202ENSMUST00000115345 Gm19426M0QWC7 77 aa7.44□□□□□ -1.22
Syn1-202ENSMUST00000115345 Herc1E9PZP8 4859 aa7.39□□□□□ -1.23
Syn1-202ENSMUST00000115345 NbdyA0A0N4SUI7 68 aa7.36□□□□□ -1.23
Syn1-202ENSMUST00000115345 Fat3Q8BNA6 4555 aa7.36□□□□□ -1.23
Syn1-202ENSMUST00000115345 Krtap19-5O08632 62 aa7.28□□□□□ -1.24
Syn1-202ENSMUST00000115345 Lrp1bQ9JI18 4599 aa7.28□□□□□ -1.24
Syn1-202ENSMUST00000115345 Fat2Q5F226 4351 aa7.21□□□□□ -1.25
Syn1-202ENSMUST00000115345 1600014C23RikQ9DAX4 101 aa7.19□□□□□ -1.26
Syn1-202ENSMUST00000115345 Gm17416Q30KP4 66 aa7.19□□□□□ -1.26
Syn1-202ENSMUST00000115345 Lrp1Q91ZX7 4545 aaKnown RBP7.18□□□□□ -1.26
Syn1-202ENSMUST00000115345 Prm1P02319 51 aa7.13□□□□□ -1.27
Syn1-202ENSMUST00000115345 Hectd4E9Q2E4 4418 aa7.11□□□□□ -1.27
Syn1-202ENSMUST00000115345 Lrp2A2ARV4 4660 aa7.11□□□□□ -1.27
Syn1-202ENSMUST00000115345 Gm7735D3YX18 52 aa7.1□□□□□ -1.27
Syn1-202ENSMUST00000115345 4932415D10RikA0A1W2P6U8 4986 aa7.05□□□□□ -1.28
Syn1-202ENSMUST00000115345 Ush2AQ2QI47 5193 aa7.04□□□□□ -1.28
Syn1-202ENSMUST00000115345 Gm11939A2A592 99 aa7.01□□□□□ -1.29
Syn1-202ENSMUST00000115345 Gm9789Q8BIG3 52 aa7□□□□□ -1.29
Syn1-202ENSMUST00000115345 Krtap13-1Q8K198 168 aa6.94□□□□□ -1.3
Syn1-202ENSMUST00000115345 Hmcn2A2AJ76 5100 aa6.94□□□□□ -1.3
Syn1-202ENSMUST00000115345 Ubr4A2AN08 5180 aa6.88□□□□□ -1.31
Syn1-202ENSMUST00000115345 Krtap3-1A2A591 98 aa6.86□□□□□ -1.31
Syn1-202ENSMUST00000115345 Gm9736A0A1W2P7N1 277 aa6.8□□□□□ -1.32
Syn1-202ENSMUST00000115345 Gm19402J3QJV4 266 aa6.68□□□□□ -1.34
Syn1-202ENSMUST00000115345 Rps29P62274 56 aa6.67□□□□□ -1.34
Syn1-202ENSMUST00000115345 Sprr2a3Q4KL71 83 aa6.67□□□□□ -1.34
Syn1-202ENSMUST00000115345 Sprr2a1Q9CQK8 83 aa6.67□□□□□ -1.34
Syn1-202ENSMUST00000115345 Gm17402F6Z0L5 76 aa6.63□□□□□ -1.35
Syn1-202ENSMUST00000115345 Krtap31-1Q9D644 177 aa6.62□□□□□ -1.35
Syn1-202ENSMUST00000115345 Krtap17-1A2A5X6 109 aa6.61□□□□□ -1.35
Syn1-202ENSMUST00000115345 2210017I01RikA0A0A6YVV1 95 aa6.55□□□□□ -1.36
Syn1-202ENSMUST00000115345 BC029722A0A0N4SW31 51 aa6.55□□□□□ -1.36
Syn1-202ENSMUST00000115345 Gm5767A0A0J9YTU8 78 aa6.54□□□□□ -1.36
Syn1-202ENSMUST00000115345 ZanO88799 5376 aa6.44□□□□□ -1.38
Syn1-202ENSMUST00000115345 Gm11562A0PK51 136 aa6.42□□□□□ -1.38
Syn1-202ENSMUST00000115345 Krtap1-3A2A588 173 aa6.41□□□□□ -1.38
Syn1-202ENSMUST00000115345 Tnp1P10856 55 aa6.4□□□□□ -1.38
Syn1-202ENSMUST00000115345 Fat4Q2PZL6 4981 aa6.4□□□□□ -1.38
Syn1-202ENSMUST00000115345 Krtap31-2Q8CAY5 177 aa6.34□□□□□ -1.39
Syn1-202ENSMUST00000115345 Rnf213E9Q555 5152 aaKnown RBP6.29□□□□□ -1.4
Syn1-202ENSMUST00000115345 LorP18165 486 aa6.22□□□□□ -1.41
Syn1-202ENSMUST00000115345 Crct1Q6PAI5 102 aa6.2□□□□□ -1.42
Syn1-202ENSMUST00000115345 Gm10061D3Z714 54 aa6.16□□□□□ -1.42
Syn1-202ENSMUST00000115345 Krtap4-2B1AQ85 167 aa6.13□□□□□ -1.43
Syn1-202ENSMUST00000115345 Spink7Q6IE32 76 aa6.12□□□□□ -1.43
Syn1-202ENSMUST00000115345 Gm11569B1AQB1 180 aa6.09□□□□□ -1.43
Syn1-202ENSMUST00000115345 SspoQ8CG65 4998 aa6.01□□□□□ -1.45
Syn1-202ENSMUST00000115345 Lce1gQ9D195 139 aa6□□□□□ -1.45
Syn1-202ENSMUST00000115345 Krtap19-3Q925H6 87 aa6□□□□□ -1.45
Syn1-202ENSMUST00000115345 2310046K23RikA0A0A6YVW6 87 aa6□□□□□ -1.45
Syn1-202ENSMUST00000115345 Krtap19-1Q925H2 87 aa5.99□□□□□ -1.45
Syn1-202ENSMUST00000115345 Krtap16-3Q8C1I6 86 aa5.98□□□□□ -1.45
Syn1-202ENSMUST00000115345 Krtap1-4Q3V2D6 188 aa5.95□□□□□ -1.46
Syn1-202ENSMUST00000115345 Gm10318A0A1W2P728 225 aa5.89□□□□□ -1.47
Syn1-202ENSMUST00000115345 Syne2Q6ZWQ0 6874 aaKnown RBP5.88□□□□□ -1.47
Syn1-202ENSMUST00000115345 Gm11555B1AQ89 175 aa5.8□□□□□ -1.48
Syn1-202ENSMUST00000115345 Muc5bE9Q5I3 4800 aa5.77□□□□□ -1.49
Syn1-202ENSMUST00000115345 Gm11596B1AQB0 205 aa5.76□□□□□ -1.49
Syn1-202ENSMUST00000115345 Krtap1-5A2A590 122 aa5.75□□□□□ -1.49
Syn1-202ENSMUST00000115345 Lce1jD3YUU5 139 aa5.65□□□□□ -1.5
Syn1-202ENSMUST00000115345 Krtap4-6Q3V4B7 195 aa5.61□□□□□ -1.51
Syn1-202ENSMUST00000115345 4933428G20RikQ9D3X4 101 aa5.61□□□□□ -1.51
Syn1-202ENSMUST00000115345 Lce1dQ9D731 133 aa5.55□□□□□ -1.52
Syn1-202ENSMUST00000115345 Krtap4-1Q3UUY3 169 aa5.52□□□□□ -1.53
Syn1-202ENSMUST00000115345 Mdn1A2ANY6 5589 aaKnown RBP5.45□□□□□ -1.54
Syn1-202ENSMUST00000115345 Krtap19-2Q925I0 141 aa5.42□□□□□ -1.54
Syn1-202ENSMUST00000115345 Gm11564A2A4L9 201 aa5.41□□□□□ -1.54
Syn1-202ENSMUST00000115345 Krtap9-5A2A5X3 358 aa5.41□□□□□ -1.54
Syn1-202ENSMUST00000115345 Gm11563B1AQ90 168 aa5.41□□□□□ -1.54
Syn1-202ENSMUST00000115345 Gm11595B1AQA7 289 aa5.41□□□□□ -1.54
Syn1-202ENSMUST00000115345 Krtap4-8B1AQA8 209 aa5.41□□□□□ -1.54
Syn1-202ENSMUST00000115345 Krtap12-1Q9Z287 130 aa5.32□□□□□ -1.56
Syn1-202ENSMUST00000115345 Gm11938Q9D3H4 131 aa5.3□□□□□ -1.56
Syn1-202ENSMUST00000115345 Sprr2iO70560 76 aa5.29□□□□□ -1.56
Syn1-202ENSMUST00000115345 Sprr2gO70558 76 aa5.29□□□□□ -1.56
Syn1-202ENSMUST00000115345 Krtap8-1O08633 61 aa5.29□□□□□ -1.56
Syn1-202ENSMUST00000115345 Lce1eQ9D139 143 aa5.27□□□□□ -1.57
Syn1-202ENSMUST00000115345 Krtap4-9B1AQA9 244 aa5.23□□□□□ -1.57
Syn1-202ENSMUST00000115345 Krtap9-3Q3V2C1 136 aa5.22□□□□□ -1.57
Syn1-202ENSMUST00000115345 Gm6358A0A087WPH4 74 aa5.21□□□□□ -1.57
Syn1-202ENSMUST00000115345 Gm10272F7CZ33 110 aa5.2□□□□□ -1.58
Syn1-202ENSMUST00000115345 Lce1hQ9D6R3 140 aa5.14□□□□□ -1.59
Syn1-202ENSMUST00000115345 Krtap19-9bQ99NG9 58 aa5.13□□□□□ -1.59
Syn1-202ENSMUST00000115345 Mt4P47945 62 aa5.1□□□□□ -1.59
Syn1-202ENSMUST00000115345 Krtap6-3A0A087WQL6 57 aa5.1□□□□□ -1.59
Syn1-202ENSMUST00000115345 Fsip2A2ARZ3 6995 aa5.06□□□□□ -1.6
Syn1-202ENSMUST00000115345 Krtap19-9aF8WH65 55 aa5.06□□□□□ -1.6
Syn1-202ENSMUST00000115345 Sprr2dO70555 85 aa5.04□□□□□ -1.6
Syn1-202ENSMUST00000115345 Krtap4-13Q9D7P3 165 aa5.03□□□□□ -1.6
Syn1-202ENSMUST00000115345 Sprr2fO70557 76 aa5□□□□□ -1.61
Syn1-202ENSMUST00000115345 Lce1iQ9D6P5 149 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms