RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Gm11939A2A592 99 aa2.57□□□□□ -2
Scn1a-204ENSMUST00000112371 Ubr4A2AN08 5180 aa2.56□□□□□ -2
Scn1a-204ENSMUST00000112371 Kmt2cQ8BRH4 4903 aa2.54□□□□□ -2
Scn1a-204ENSMUST00000112371 Dnah14A0A140LIJ4 4489 aa2.54□□□□□ -2
Scn1a-204ENSMUST00000112371 4932415D10RikA0A1W2P6U8 4986 aa2.52□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Krtap3-1A2A591 98 aa2.5□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Dnah3Q8BW94 4083 aa2.5□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Krtap13-1Q8K198 168 aa2.5□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Hmcn2A2AJ76 5100 aa2.48□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Sprr2a3Q4KL71 83 aa2.48□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Sprr2a1Q9CQK8 83 aa2.48□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Dnah17Q69Z23 4481 aa2.48□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Dnah5Q8VHE6 4621 aa2.48□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Gm9736A0A1W2P7N1 277 aa2.47□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Dnah10D3YYQ8 4591 aa2.47□□□□□ -2.01
Scn1a-204ENSMUST00000112371 Lrp1bQ9JI18 4599 aa2.45□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Dnah2P0C6F1 4456 aa2.45□□□□□ -2.02
Scn1a-204ENSMUST00000112371 SacsQ9JLC8 4582 aa2.44□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Dnah7bL7N1Y0 4068 aa2.44□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Dnah7cA0A087WR13 4024 aa2.44□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Krtap7-1Q9D3I6 87 aa2.44□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Krtap1-5A2A590 122 aa2.44□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Rnf213E9Q555 5152 aaKnown RBP2.42□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Ush2AQ2QI47 5193 aa2.41□□□□□ -2.02
Scn1a-204ENSMUST00000112371 2310046K23RikA0A0A6YVW6 87 aa2.41□□□□□ -2.02
Scn1a-204ENSMUST00000112371 Dnah7aE9Q0T8 4024 aa2.4□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Gm10318A0A1W2P728 225 aa2.38□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Fat3Q8BNA6 4555 aa2.38□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Fat4Q2PZL6 4981 aa2.38□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Krtap19-9bQ99NG9 58 aa2.37□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Crct1Q6PAI5 102 aa2.35□□□□□ -2.03
Scn1a-204ENSMUST00000112371 Dnah6E9Q0B6 4144 aa2.35□□□□□ -2.03
Scn1a-204ENSMUST00000112371 ApobE9Q414 4505 aa2.34□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Fat1A0A1L1SQU7 4645 aa2.34□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Vps13bQ80TY5 3993 aa2.33□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Dnah11E9Q7N9 4488 aa2.32□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Sprr2kO70562 68 aa2.32□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Gm18596A0A1W2P860 280 aa2.32□□□□□ -2.04
Scn1a-204ENSMUST00000112371 TnxbO35452 4006 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 ZanO88799 5376 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Krtap19-9aF8WH65 55 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Dnah9B1AR51 4484 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Fras1Q80T14 4010 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Krtap19-5O08632 62 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Kmt2aP55200 3966 aa2.31□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Vps13dB1ART2 4390 aa2.28□□□□□ -2.04
Scn1a-204ENSMUST00000112371 Mycbp2Q7TPH6 4711 aa2.26□□□□□ -2.05
Scn1a-204ENSMUST00000112371 A030014E15RikA0A1Y7VJV2 120 aa2.25□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Huwe1Q7TMY8 4377 aaKnown RBP2.25□□□□□ -2.05
Scn1a-204ENSMUST00000112371 SspoQ8CG65 4998 aa2.25□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Gm19402J3QJV4 266 aa2.24□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Krtap8-1O08633 61 aa2.24□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Gm6358A0A087WPH4 74 aa2.23□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Sprr2gO70558 76 aa2.22□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Pkd1O08852 4293 aa2.22□□□□□ -2.05
Scn1a-204ENSMUST00000112371 Muc5bE9Q5I3 4800 aa2.21□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Lrp2A2ARV4 4660 aa2.21□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Krtap1-4Q3V2D6 188 aa2.19□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Dnah1E9Q8T7 4250 aa2.19□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Dync2h1Q45VK7 4306 aa2.18□□□□□ -2.06
Scn1a-204ENSMUST00000112371 PrkdcP97313 4128 aa2.17□□□□□ -2.06
Scn1a-204ENSMUST00000112371 A0A286YCP9 139 aa2.15□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Krtap31-1Q9D644 177 aa2.15□□□□□ -2.06
Scn1a-204ENSMUST00000112371 Hectd4E9Q2E4 4418 aa2.15□□□□□ -2.07
Scn1a-204ENSMUST00000112371 Lce1mQ9CR91 182 aa2.12□□□□□ -2.07
Scn1a-204ENSMUST00000112371 LorP18165 486 aa2.11□□□□□ -2.07
Scn1a-204ENSMUST00000112371 Krtap31-2Q8CAY5 177 aa2.11□□□□□ -2.07
Scn1a-204ENSMUST00000112371 Pkhd1E9PZ36 4059 aa2.1□□□□□ -2.07
Scn1a-204ENSMUST00000112371 Krtap12-1Q9Z287 130 aa2.1□□□□□ -2.07
Scn1a-204ENSMUST00000112371 Fat2Q5F226 4351 aa2.08□□□□□ -2.08
Scn1a-204ENSMUST00000112371 Lrp1Q91ZX7 4545 aaKnown RBP2.06□□□□□ -2.08
Scn1a-204ENSMUST00000112371 Krtap19-4Q925H7 84 aa2.01□□□□□ -2.09
Scn1a-204ENSMUST00000112371 Mt3P28184 68 aa1.99□□□□□ -2.09
Scn1a-204ENSMUST00000112371 Gm10100J3QK64 120 aa1.98□□□□□ -2.09
Scn1a-204ENSMUST00000112371 Gm10272F7CZ33 110 aa1.96□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Lce3bQ9CQM7 98 aa1.96□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Sprr2fO70557 76 aa1.96□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Gm10142J3KMP7 120 aa1.95□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Sprr2iO70560 76 aa1.95□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Mt2P02798 61 aa1.95□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Krtap19-1Q925H2 87 aa1.95□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Prm1P02319 51 aa1.94□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Sprr2hO70559 108 aa1.94□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Krtap16-3Q8C1I6 86 aa1.93□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Gm7735D3YX18 52 aa1.93□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Krtap19-3Q925H6 87 aa1.93□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Sprr2dO70555 85 aa1.93□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Gm9789Q8BIG3 52 aa1.92□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Mdn1A2ANY6 5589 aaKnown RBP1.92□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Gm38119A0A0A6YX29 146 aa1.92□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Krtap1-3A2A588 173 aa1.92□□□□□ -2.1
Scn1a-204ENSMUST00000112371 Pkhd1l1Q80ZA4 4249 aa1.88□□□□□ -2.11
Scn1a-204ENSMUST00000112371 Krtap9-5A2A5X3 358 aa1.87□□□□□ -2.11
Scn1a-204ENSMUST00000112371 Krtap17-1A2A5X6 109 aa1.87□□□□□ -2.11
Scn1a-204ENSMUST00000112371 Lce3cQ91V05 98 aa1.87□□□□□ -2.11
Scn1a-204ENSMUST00000112371 Krtap9-3Q3V2C1 136 aa1.87□□□□□ -2.11
Scn1a-204ENSMUST00000112371 Lce3dE9Q8V1 98 aa1.83□□□□□ -2.12
Scn1a-204ENSMUST00000112371 Krtap22-2J3QNX6 67 aa1.83□□□□□ -2.12
Scn1a-204ENSMUST00000112371 Sprr2eO70556 76 aa1.82□□□□□ -2.12
Scn1a-204ENSMUST00000112371 Krtap4-2B1AQ85 167 aa1.8□□□□□ -2.12
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms