RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Krtap15-1Q9QZU5 150 aa4.4□□□□□ -1.7
Bdnf-208ENSMUST00000111049 Dnah7aE9Q0T8 4024 aa4.4□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Ryr3A2AGL3 4863 aa4.38□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Stard9Q80TF6 4561 aa4.38□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Ndufaf8A2AMZ4 74 aa4.37□□□□□ -1.71
Bdnf-208ENSMUST00000111049 CriptO70333 101 aa4.37□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Lrp1bQ9JI18 4599 aa4.37□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Dnah2P0C6F1 4456 aa4.37□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Gm10382Q3V0T5 144 aa4.36□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Rpl37Q9D823 97 aa4.35□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Gm9112A2AI92 75 aa4.34□□□□□ -1.71
Bdnf-208ENSMUST00000111049 Hectd4E9Q2E4 4418 aa4.33□□□□□ -1.72
Bdnf-208ENSMUST00000111049 ApobE9Q414 4505 aa4.31□□□□□ -1.72
Bdnf-208ENSMUST00000111049 Ryr1E9PZQ0 5035 aa4.3□□□□□ -1.72
Bdnf-208ENSMUST00000111049 Gm5965D3Z724 196 aa4.28□□□□□ -1.72
Bdnf-208ENSMUST00000111049 Pkd1O08852 4293 aa4.26□□□□□ -1.73
Bdnf-208ENSMUST00000111049 Gm9736A0A1W2P7N1 277 aa4.23□□□□□ -1.73
Bdnf-208ENSMUST00000111049 Ryr2E9Q401 4966 aaKnown RBP4.21□□□□□ -1.74
Bdnf-208ENSMUST00000111049 SacsQ9JLC8 4582 aa4.21□□□□□ -1.74
Bdnf-208ENSMUST00000111049 2310057N15RikQ9D6T8 200 aa4.2□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Gm17416Q30KP4 66 aa4.19□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Krtap19-5O08632 62 aa4.18□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Dync1h1Q9JHU4 4644 aaKnown RBP4.17□□□□□ -1.74
Bdnf-208ENSMUST00000111049 BC029722A0A0N4SW31 51 aa4.16□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Fat1A0A1L1SQU7 4645 aa4.16□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Gm19426M0QWC7 77 aa4.16□□□□□ -1.74
Bdnf-208ENSMUST00000111049 Fat2Q5F226 4351 aa4.14□□□□□ -1.75
Bdnf-208ENSMUST00000111049 Vps13bQ80TY5 3993 aa4.11□□□□□ -1.75
Bdnf-208ENSMUST00000111049 Krtap3-1A2A591 98 aa4.1□□□□□ -1.75
Bdnf-208ENSMUST00000111049 Fam229aB2KGE5 128 aa4.1□□□□□ -1.75
Bdnf-208ENSMUST00000111049 Lrp1Q91ZX7 4545 aaKnown RBP4.1□□□□□ -1.75
Bdnf-208ENSMUST00000111049 Pkhd1E9PZ36 4059 aa4.08□□□□□ -1.76
Bdnf-208ENSMUST00000111049 B930094E09RikQ8C4T2 136 aa4.07□□□□□ -1.76
Bdnf-208ENSMUST00000111049 Gm18596A0A1W2P860 280 aa4.07□□□□□ -1.76
Bdnf-208ENSMUST00000111049 Spink7Q6IE32 76 aa4.04□□□□□ -1.76
Bdnf-208ENSMUST00000111049 Kmt2cQ8BRH4 4903 aa4.04□□□□□ -1.76
Bdnf-208ENSMUST00000111049 Herc2Q4U2R1 4836 aa4.03□□□□□ -1.76
Bdnf-208ENSMUST00000111049 Abca13Q5SSE9 5034 aa4.01□□□□□ -1.77
Bdnf-208ENSMUST00000111049 Camk2n1Q6QWF9 78 aa4□□□□□ -1.77
Bdnf-208ENSMUST00000111049 Kiaa1109A2AAE1 5005 aa3.99□□□□□ -1.77
Bdnf-208ENSMUST00000111049 Lce1jD3YUU5 139 aa3.97□□□□□ -1.77
Bdnf-208ENSMUST00000111049 Krtap13-1Q8K198 168 aa3.97□□□□□ -1.77
Bdnf-208ENSMUST00000111049 HydinQ80W93 5154 aa3.97□□□□□ -1.77
Bdnf-208ENSMUST00000111049 Fat3Q8BNA6 4555 aa3.96□□□□□ -1.78
Bdnf-208ENSMUST00000111049 Pkhd1l1Q80ZA4 4249 aa3.95□□□□□ -1.78
Bdnf-208ENSMUST00000111049 Gm17402F6Z0L5 76 aa3.94□□□□□ -1.78
Bdnf-208ENSMUST00000111049 PcloQ9QYX7 5068 aa3.94□□□□□ -1.78
Bdnf-208ENSMUST00000111049 Dnah8Q91XQ0 4731 aa3.94□□□□□ -1.78
Bdnf-208ENSMUST00000111049 Mycbp2Q7TPH6 4711 aa3.92□□□□□ -1.78
Bdnf-208ENSMUST00000111049 Birc6O88738 4882 aa3.9□□□□□ -1.79
Bdnf-208ENSMUST00000111049 Gm40193A0A1B0GT39 78 aa3.9□□□□□ -1.79
Bdnf-208ENSMUST00000111049 Dnhd1D3Z2X2 4750 aa3.85□□□□□ -1.79
Bdnf-208ENSMUST00000111049 Lrp2A2ARV4 4660 aa3.85□□□□□ -1.79
Bdnf-208ENSMUST00000111049 Herc1E9PZP8 4859 aa3.82□□□□□ -1.8
Bdnf-208ENSMUST00000111049 Krtap1-5A2A590 122 aa3.81□□□□□ -1.8
Bdnf-208ENSMUST00000111049 Krtap7-1Q9D3I6 87 aa3.8□□□□□ -1.8
Bdnf-208ENSMUST00000111049 Gm10318A0A1W2P728 225 aa3.78□□□□□ -1.8
Bdnf-208ENSMUST00000111049 Krtap4-9B1AQA9 244 aa3.76□□□□□ -1.81
Bdnf-208ENSMUST00000111049 Sprr2a3Q4KL71 83 aa3.75□□□□□ -1.81
Bdnf-208ENSMUST00000111049 Sprr2a1Q9CQK8 83 aa3.75□□□□□ -1.81
Bdnf-208ENSMUST00000111049 Crct1Q6PAI5 102 aa3.75□□□□□ -1.81
Bdnf-208ENSMUST00000111049 Krtap31-1Q9D644 177 aa3.69□□□□□ -1.82
Bdnf-208ENSMUST00000111049 Gm45618A0A1B0GSA0 219 aa3.69□□□□□ -1.82
Bdnf-208ENSMUST00000111049 Tnp1P10856 55 aa3.64□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Krtap16-3Q8C1I6 86 aa3.62□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Lce1hQ9D6R3 140 aa3.62□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Gm39115A0A1B0GSH7 232 aa3.62□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Lce1cQ9D1C5 147 aa3.61□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Ubr4A2AN08 5180 aa3.6□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Krtap1-4Q3V2D6 188 aa3.59□□□□□ -1.83
Bdnf-208ENSMUST00000111049 Krtap31-2Q8CAY5 177 aa3.59□□□□□ -1.83
Bdnf-208ENSMUST00000111049 LorP18165 486 aa3.59□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Ush2AQ2QI47 5193 aa3.58□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Gm11569B1AQB1 180 aa3.57□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Gm11554B1AQB2 190 aa3.57□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Krtap19-1Q925H2 87 aa3.56□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Lce1kJ3QP15 125 aa3.55□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Krtap19-3Q925H6 87 aa3.55□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Lce1fB9EJP6 147 aa3.54□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Lce1bQ9D149 137 aa3.54□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Gm2431E9Q8S1 172 aa3.53□□□□□ -1.84
Bdnf-208ENSMUST00000111049 Hmcn2A2AJ76 5100 aa3.52□□□□□ -1.85
Bdnf-208ENSMUST00000111049 Gm11567Q9D141 195 aa3.47□□□□□ -1.85
Bdnf-208ENSMUST00000111049 Krtap19-9aF8WH65 55 aa3.45□□□□□ -1.86
Bdnf-208ENSMUST00000111049 4932415D10RikA0A1W2P6U8 4986 aa3.45□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Gm29735A0A1B0GT06 219 aa3.44□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Krtap12-1Q9Z287 130 aa3.43□□□□□ -1.86
Bdnf-208ENSMUST00000111049 ZanO88799 5376 aa3.43□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Gm7735D3YX18 52 aa3.42□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Gm9789Q8BIG3 52 aa3.42□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Prm1P02319 51 aa3.4□□□□□ -1.86
Bdnf-208ENSMUST00000111049 Krtap1-3A2A588 173 aa3.36□□□□□ -1.87
Bdnf-208ENSMUST00000111049 Fat4Q2PZL6 4981 aa3.35□□□□□ -1.87
Bdnf-208ENSMUST00000111049 Rnf213E9Q555 5152 aaKnown RBP3.31□□□□□ -1.88
Bdnf-208ENSMUST00000111049 Gm11595B1AQA7 289 aa3.3□□□□□ -1.88
Bdnf-208ENSMUST00000111049 Krtap19-9bQ99NG9 58 aa3.3□□□□□ -1.88
Bdnf-208ENSMUST00000111049 Krtap8-1O08633 61 aa3.28□□□□□ -1.88
Bdnf-208ENSMUST00000111049 2310046K23RikA0A0A6YVW6 87 aa3.23□□□□□ -1.89
Bdnf-208ENSMUST00000111049 Lce1eQ9D139 143 aa3.2□□□□□ -1.9
Bdnf-208ENSMUST00000111049 Krtap9-5A2A5X3 358 aa3.18□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms