RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Pkhd1E9PZ36 4059 aa3.87□□□□□ -1.79
Bdnf-204ENSMUST00000111044 Gm5767A0A0J9YTU8 78 aa3.86□□□□□ -1.79
Bdnf-204ENSMUST00000111044 Krtap4-1Q3UUY3 169 aa3.85□□□□□ -1.79
Bdnf-204ENSMUST00000111044 Vps13bQ80TY5 3993 aa3.82□□□□□ -1.8
Bdnf-204ENSMUST00000111044 2310057N15RikQ9D6T8 200 aa3.8□□□□□ -1.8
Bdnf-204ENSMUST00000111044 B930094E09RikQ8C4T2 136 aa3.8□□□□□ -1.8
Bdnf-204ENSMUST00000111044 Ryr3A2AGL3 4863 aa3.78□□□□□ -1.8
Bdnf-204ENSMUST00000111044 Fat1A0A1L1SQU7 4645 aa3.78□□□□□ -1.8
Bdnf-204ENSMUST00000111044 Krtap7-1Q9D3I6 87 aa3.77□□□□□ -1.81
Bdnf-204ENSMUST00000111044 SacsQ9JLC8 4582 aa3.76□□□□□ -1.81
Bdnf-204ENSMUST00000111044 Dync1h1Q9JHU4 4644 aaKnown RBP3.76□□□□□ -1.81
Bdnf-204ENSMUST00000111044 2210017I01RikA0A0A6YVV1 95 aa3.74□□□□□ -1.81
Bdnf-204ENSMUST00000111044 Fat2Q5F226 4351 aa3.74□□□□□ -1.81
Bdnf-204ENSMUST00000111044 Pkhd1l1Q80ZA4 4249 aa3.74□□□□□ -1.81
Bdnf-204ENSMUST00000111044 Krtap15-1Q9QZU5 150 aa3.73□□□□□ -1.81
Bdnf-204ENSMUST00000111044 BC029722A0A0N4SW31 51 aa3.72□□□□□ -1.81
Bdnf-204ENSMUST00000111044 Lrp1Q91ZX7 4545 aaKnown RBP3.7□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Krtap3-1A2A591 98 aa3.7□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Gm17416Q30KP4 66 aa3.69□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Sec61bQ9CQS8 96 aaKnown RBP3.67□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Gm9736A0A1W2P7N1 277 aa3.66□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Gm17402F6Z0L5 76 aa3.65□□□□□ -1.82
Bdnf-204ENSMUST00000111044 Krtap19-5O08632 62 aa3.64□□□□□ -1.83
Bdnf-204ENSMUST00000111044 Gm11563B1AQ90 168 aa3.63□□□□□ -1.83
Bdnf-204ENSMUST00000111044 Krtap4-7Q9D732 168 aa3.63□□□□□ -1.83
Bdnf-204ENSMUST00000111044 Ryr2E9Q401 4966 aaKnown RBP3.59□□□□□ -1.83
Bdnf-204ENSMUST00000111044 Gm19668J3QMD1 248 aa3.59□□□□□ -1.83
Bdnf-204ENSMUST00000111044 Kmt2cQ8BRH4 4903 aa3.59□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Camk2n1Q6QWF9 78 aa3.57□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Mycbp2Q7TPH6 4711 aa3.56□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Fat3Q8BNA6 4555 aa3.55□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Spink7Q6IE32 76 aa3.55□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Abca13Q5SSE9 5034 aa3.54□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Gm11555B1AQ89 175 aa3.53□□□□□ -1.84
Bdnf-204ENSMUST00000111044 Ryr1E9PZQ0 5035 aa3.51□□□□□ -1.85
Bdnf-204ENSMUST00000111044 Krtap13-1Q8K198 168 aa3.51□□□□□ -1.85
Bdnf-204ENSMUST00000111044 Dnah8Q91XQ0 4731 aa3.47□□□□□ -1.85
Bdnf-204ENSMUST00000111044 Krtap4-2B1AQ85 167 aa3.47□□□□□ -1.85
Bdnf-204ENSMUST00000111044 Tnp1P10856 55 aa3.45□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Kiaa1109A2AAE1 5005 aa3.44□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Gm19402J3QJV4 266 aa3.43□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Herc2Q4U2R1 4836 aa3.43□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Sprr2a3Q4KL71 83 aa3.41□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Sprr2a1Q9CQK8 83 aa3.41□□□□□ -1.86
Bdnf-204ENSMUST00000111044 HydinQ80W93 5154 aa3.4□□□□□ -1.86
Bdnf-204ENSMUST00000111044 Gm18596A0A1W2P860 280 aa3.4□□□□□ -1.87
Bdnf-204ENSMUST00000111044 Lce1mQ9CR91 182 aa3.38□□□□□ -1.87
Bdnf-204ENSMUST00000111044 Lrp2A2ARV4 4660 aa3.37□□□□□ -1.87
Bdnf-204ENSMUST00000111044 Dnhd1D3Z2X2 4750 aa3.31□□□□□ -1.88
Bdnf-204ENSMUST00000111044 Birc6O88738 4882 aa3.31□□□□□ -1.88
Bdnf-204ENSMUST00000111044 Krtap1-5A2A590 122 aa3.3□□□□□ -1.88
Bdnf-204ENSMUST00000111044 PcloQ9QYX7 5068 aa3.28□□□□□ -1.88
Bdnf-204ENSMUST00000111044 Gm10318A0A1W2P728 225 aa3.27□□□□□ -1.89
Bdnf-204ENSMUST00000111044 Krtap17-1A2A5X6 109 aa3.25□□□□□ -1.89
Bdnf-204ENSMUST00000111044 Crct1Q6PAI5 102 aa3.24□□□□□ -1.89
Bdnf-204ENSMUST00000111044 Prm1P02319 51 aa3.16□□□□□ -1.9
Bdnf-204ENSMUST00000111044 Krtap16-3Q8C1I6 86 aa3.16□□□□□ -1.9
Bdnf-204ENSMUST00000111044 Herc1E9PZP8 4859 aa3.16□□□□□ -1.9
Bdnf-204ENSMUST00000111044 Krtap19-1Q925H2 87 aa3.1□□□□□ -1.91
Bdnf-204ENSMUST00000111044 2310046K23RikA0A0A6YVW6 87 aa3.1□□□□□ -1.91
Bdnf-204ENSMUST00000111044 Gm7735D3YX18 52 aa3.1□□□□□ -1.91
Bdnf-204ENSMUST00000111044 Krtap19-3Q925H6 87 aa3.09□□□□□ -1.91
Bdnf-204ENSMUST00000111044 Krtap1-4Q3V2D6 188 aa3.07□□□□□ -1.92
Bdnf-204ENSMUST00000111044 Ubr4A2AN08 5180 aa3.05□□□□□ -1.92
Bdnf-204ENSMUST00000111044 Krtap31-2Q8CAY5 177 aa3.05□□□□□ -1.92
Bdnf-204ENSMUST00000111044 Lce1dQ9D731 133 aa3.04□□□□□ -1.92
Bdnf-204ENSMUST00000111044 ZanO88799 5376 aa3.03□□□□□ -1.92
Bdnf-204ENSMUST00000111044 Lce1jD3YUU5 139 aa3.02□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Gm11562A0PK51 136 aa3.01□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Ush2AQ2QI47 5193 aa3.01□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Gm45618A0A1B0GSA0 219 aa2.99□□□□□ -1.93
Bdnf-204ENSMUST00000111044 4933428G20RikQ9D3X4 101 aa2.99□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Fat4Q2PZL6 4981 aa2.99□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Krtap1-3A2A588 173 aa2.98□□□□□ -1.93
Bdnf-204ENSMUST00000111044 4932415D10RikA0A1W2P6U8 4986 aa2.98□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Gm9789Q8BIG3 52 aa2.98□□□□□ -1.93
Bdnf-204ENSMUST00000111044 LorP18165 486 aa2.98□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Hmcn2A2AJ76 5100 aa2.97□□□□□ -1.93
Bdnf-204ENSMUST00000111044 Krtap8-1O08633 61 aa2.93□□□□□ -1.94
Bdnf-204ENSMUST00000111044 Krtap19-9aF8WH65 55 aa2.92□□□□□ -1.94
Bdnf-204ENSMUST00000111044 Krtap31-1Q9D644 177 aa2.92□□□□□ -1.94
Bdnf-204ENSMUST00000111044 Krtap19-9bQ99NG9 58 aa2.92□□□□□ -1.94
Bdnf-204ENSMUST00000111044 Lce1hQ9D6R3 140 aa2.9□□□□□ -1.95
Bdnf-204ENSMUST00000111044 Krtap12-1Q9Z287 130 aa2.89□□□□□ -1.95
Bdnf-204ENSMUST00000111044 Lce1bQ9D149 137 aa2.88□□□□□ -1.95
Bdnf-204ENSMUST00000111044 Rnf213E9Q555 5152 aaKnown RBP2.87□□□□□ -1.95
Bdnf-204ENSMUST00000111044 Hmcn1D3YXG0 5634 aa2.82□□□□□ -1.96
Bdnf-204ENSMUST00000111044 Gm39115A0A1B0GSH7 232 aa2.76□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Krtap9-5A2A5X3 358 aa2.75□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Krtap19-2Q925I0 141 aa2.74□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Sprr2gO70558 76 aa2.74□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Lce1gQ9D195 139 aa2.74□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Lce1iQ9D6P5 149 aa2.73□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Krtap9-3Q3V2C1 136 aa2.72□□□□□ -1.97
Bdnf-204ENSMUST00000111044 Lce1a2Q9D1K4 149 aa2.71□□□□□ -1.98
Bdnf-204ENSMUST00000111044 Lce1eQ9D139 143 aa2.7□□□□□ -1.98
Bdnf-204ENSMUST00000111044 Gm11569B1AQB1 180 aa2.68□□□□□ -1.98
Bdnf-204ENSMUST00000111044 SspoQ8CG65 4998 aa2.68□□□□□ -1.98
Bdnf-204ENSMUST00000111044 Gm38119A0A0A6YX29 146 aa2.66□□□□□ -1.98
Bdnf-204ENSMUST00000111044 Gm10061D3Z714 54 aa2.66□□□□□ -1.98
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms