RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Ndufs5Q99LY9 106 aa7.46□□□□□ -1.22
Trim11-203ENSMUST00000108810 Gm17606F6ZL36 78 aa7.43□□□□□ -1.22
Trim11-203ENSMUST00000108810 Gm20537G3UYK7 97 aa7.41□□□□□ -1.22
Trim11-203ENSMUST00000108810 2310057N15RikQ9D6T8 200 aa7.39□□□□□ -1.23
Trim11-203ENSMUST00000108810 Sec61bQ9CQS8 96 aaKnown RBP7.38□□□□□ -1.23
Trim11-203ENSMUST00000108810 Krtap13-1Q8K198 168 aa7.34□□□□□ -1.23
Trim11-203ENSMUST00000108810 Herc1E9PZP8 4859 aa7.33□□□□□ -1.24
Trim11-203ENSMUST00000108810 Gm9955Q8CEJ8 102 aa7.32□□□□□ -1.24
Trim11-203ENSMUST00000108810 Lce1mQ9CR91 182 aa7.3□□□□□ -1.24
Trim11-203ENSMUST00000108810 Pla2g10Q9QXX3 151 aa7.24□□□□□ -1.25
Trim11-203ENSMUST00000108810 Krtap16-3Q8C1I6 86 aa7.23□□□□□ -1.25
Trim11-203ENSMUST00000108810 Krtap1-5A2A590 122 aa7.22□□□□□ -1.25
Trim11-203ENSMUST00000108810 Gm3880A0A1B0GSB3 72 aa7.17□□□□□ -1.26
Trim11-203ENSMUST00000108810 Krtap19-1Q925H2 87 aa7.16□□□□□ -1.26
Trim11-203ENSMUST00000108810 Crct1Q6PAI5 102 aa7.13□□□□□ -1.27
Trim11-203ENSMUST00000108810 Krtap19-3Q925H6 87 aa7.1□□□□□ -1.27
Trim11-203ENSMUST00000108810 BC029722A0A0N4SW31 51 aa7.1□□□□□ -1.27
Trim11-203ENSMUST00000108810 Ush2AQ2QI47 5193 aa7.08□□□□□ -1.28
Trim11-203ENSMUST00000108810 Fam229aB2KGE5 128 aa7.07□□□□□ -1.28
Trim11-203ENSMUST00000108810 Gm10318A0A1W2P728 225 aa7.06□□□□□ -1.28
Trim11-203ENSMUST00000108810 Hmcn2A2AJ76 5100 aa7.06□□□□□ -1.28
Trim11-203ENSMUST00000108810 Gm12216A0A1W2P827 62 aa6.98□□□□□ -1.29
Trim11-203ENSMUST00000108810 ZanO88799 5376 aa6.95□□□□□ -1.3
Trim11-203ENSMUST00000108810 Ubr4A2AN08 5180 aa6.93□□□□□ -1.3
Trim11-203ENSMUST00000108810 Krtap1-3A2A588 173 aa6.93□□□□□ -1.3
Trim11-203ENSMUST00000108810 B930094E09RikQ8C4T2 136 aa6.93□□□□□ -1.3
Trim11-203ENSMUST00000108810 Gm18596A0A1W2P860 280 aa6.92□□□□□ -1.3
Trim11-203ENSMUST00000108810 Gm19402J3QJV4 266 aa6.92□□□□□ -1.3
Trim11-203ENSMUST00000108810 Gm9789Q8BIG3 52 aa6.92□□□□□ -1.3
Trim11-203ENSMUST00000108810 4932415D10RikA0A1W2P6U8 4986 aa6.89□□□□□ -1.31
Trim11-203ENSMUST00000108810 Gm17402F6Z0L5 76 aa6.88□□□□□ -1.31
Trim11-203ENSMUST00000108810 Gm19426M0QWC7 77 aa6.85□□□□□ -1.31
Trim11-203ENSMUST00000108810 Prm1P02319 51 aa6.83□□□□□ -1.32
Trim11-203ENSMUST00000108810 Romo1P60603 79 aa6.83□□□□□ -1.32
Trim11-203ENSMUST00000108810 Gm7735D3YX18 52 aa6.8□□□□□ -1.32
Trim11-203ENSMUST00000108810 Krtap1-4Q3V2D6 188 aa6.79□□□□□ -1.32
Trim11-203ENSMUST00000108810 Sprr2a3Q4KL71 83 aa6.78□□□□□ -1.32
Trim11-203ENSMUST00000108810 Sprr2a1Q9CQK8 83 aa6.78□□□□□ -1.32
Trim11-203ENSMUST00000108810 CriptO70333 101 aa6.75□□□□□ -1.33
Trim11-203ENSMUST00000108810 Gm21887J3QQ04 176 aa6.73□□□□□ -1.33
Trim11-203ENSMUST00000108810 LorP18165 486 aa6.72□□□□□ -1.33
Trim11-203ENSMUST00000108810 Spink7Q6IE32 76 aa6.72□□□□□ -1.33
Trim11-203ENSMUST00000108810 Fat4Q2PZL6 4981 aa6.71□□□□□ -1.34
Trim11-203ENSMUST00000108810 Rnf213E9Q555 5152 aaKnown RBP6.7□□□□□ -1.34
Trim11-203ENSMUST00000108810 Lce1jD3YUU5 139 aa6.59□□□□□ -1.35
Trim11-203ENSMUST00000108810 Mp68P56379 58 aa6.59□□□□□ -1.36
Trim11-203ENSMUST00000108810 Gm20538F6Z9R1 75 aa6.58□□□□□ -1.36
Trim11-203ENSMUST00000108810 Krtap12-1Q9Z287 130 aa6.53□□□□□ -1.36
Trim11-203ENSMUST00000108810 SspoQ8CG65 4998 aa6.46□□□□□ -1.37
Trim11-203ENSMUST00000108810 Krtap19-9aF8WH65 55 aa6.46□□□□□ -1.38
Trim11-203ENSMUST00000108810 Krtap17-1A2A5X6 109 aa6.35□□□□□ -1.39
Trim11-203ENSMUST00000108810 Gm19668J3QMD1 248 aa6.35□□□□□ -1.39
Trim11-203ENSMUST00000108810 Prm2P07978 107 aa6.33□□□□□ -1.4
Trim11-203ENSMUST00000108810 Krtap7-1Q9D3I6 87 aa6.33□□□□□ -1.4
Trim11-203ENSMUST00000108810 Krtap19-2Q925I0 141 aa6.3□□□□□ -1.4
Trim11-203ENSMUST00000108810 Camk2n1Q6QWF9 78 aa6.3□□□□□ -1.4
Trim11-203ENSMUST00000108810 Krtap9-5A2A5X3 358 aa6.24□□□□□ -1.41
Trim11-203ENSMUST00000108810 Gm10061D3Z714 54 aa6.19□□□□□ -1.42
Trim11-203ENSMUST00000108810 Lce1iQ9D6P5 149 aa6.19□□□□□ -1.42
Trim11-203ENSMUST00000108810 Gm40193A0A1B0GT39 78 aa6.17□□□□□ -1.42
Trim11-203ENSMUST00000108810 Lce1a2Q9D1K4 149 aa6.13□□□□□ -1.43
Trim11-203ENSMUST00000108810 Ndufaf8A2AMZ4 74 aa6.13□□□□□ -1.43
Trim11-203ENSMUST00000108810 Krtap8-1O08633 61 aa6.04□□□□□ -1.44
Trim11-203ENSMUST00000108810 Muc5bE9Q5I3 4800 aa6□□□□□ -1.45
Trim11-203ENSMUST00000108810 Krtap19-9bQ99NG9 58 aa5.94□□□□□ -1.46
Trim11-203ENSMUST00000108810 Gm6358A0A087WPH4 74 aa5.93□□□□□ -1.46
Trim11-203ENSMUST00000108810 Mt2P02798 61 aa5.83□□□□□ -1.48
Trim11-203ENSMUST00000108810 Gm11569B1AQB1 180 aa5.82□□□□□ -1.48
Trim11-203ENSMUST00000108810 Tnp1P10856 55 aa5.81□□□□□ -1.48
Trim11-203ENSMUST00000108810 Krtap9-3Q3V2C1 136 aa5.72□□□□□ -1.49
Trim11-203ENSMUST00000108810 Lce1hQ9D6R3 140 aa5.66□□□□□ -1.5
Trim11-203ENSMUST00000108810 2310046K23RikA0A0A6YVW6 87 aa5.61□□□□□ -1.51
Trim11-203ENSMUST00000108810 Gm9112A2AI92 75 aa5.56□□□□□ -1.52
Trim11-203ENSMUST00000108810 Mdn1A2ANY6 5589 aaKnown RBP5.5□□□□□ -1.53
Trim11-203ENSMUST00000108810 Krtap22-2J3QNX6 67 aa5.48□□□□□ -1.53
Trim11-203ENSMUST00000108810 Gm11555B1AQ89 175 aa5.34□□□□□ -1.56
Trim11-203ENSMUST00000108810 Krtap4-6Q3V4B7 195 aa5.29□□□□□ -1.56
Trim11-203ENSMUST00000108810 Lce1gQ9D195 139 aa5.24□□□□□ -1.57
Trim11-203ENSMUST00000108810 Krtap4-2B1AQ85 167 aa5.19□□□□□ -1.58
Trim11-203ENSMUST00000108810 Krtap4-1Q3UUY3 169 aa5.19□□□□□ -1.58
Trim11-203ENSMUST00000108810 Gm10272F7CZ33 110 aa5.18□□□□□ -1.58
Trim11-203ENSMUST00000108810 Gm11596B1AQB0 205 aa5.12□□□□□ -1.59
Trim11-203ENSMUST00000108810 Lce1dQ9D731 133 aa5.09□□□□□ -1.59
Trim11-203ENSMUST00000108810 Syne2Q6ZWQ0 6874 aaKnown RBP5.04□□□□□ -1.6
Trim11-203ENSMUST00000108810 Sprr2gO70558 76 aa5.03□□□□□ -1.6
Trim11-203ENSMUST00000108810 Gm11564A2A4L9 201 aa5.02□□□□□ -1.61
Trim11-203ENSMUST00000108810 Gm11563B1AQ90 168 aa5.02□□□□□ -1.61
Trim11-203ENSMUST00000108810 Gm11595B1AQA7 289 aa5.02□□□□□ -1.61
Trim11-203ENSMUST00000108810 Krtap4-8B1AQA8 209 aa5.02□□□□□ -1.61
Trim11-203ENSMUST00000108810 Gm11562A0PK51 136 aa5.01□□□□□ -1.61
Trim11-203ENSMUST00000108810 Gm11938Q9D3H4 131 aa5.01□□□□□ -1.61
Trim11-203ENSMUST00000108810 Sprr2dO70555 85 aa5□□□□□ -1.61
Trim11-203ENSMUST00000108810 Lce1eQ9D139 143 aa4.96□□□□□ -1.61
Trim11-203ENSMUST00000108810 Mt4P47945 62 aa4.93□□□□□ -1.62
Trim11-203ENSMUST00000108810 Lce1bQ9D149 137 aa4.92□□□□□ -1.62
Trim11-203ENSMUST00000108810 Krtap4-9B1AQA9 244 aa4.9□□□□□ -1.62
Trim11-203ENSMUST00000108810 Syne1Q6ZWR6 8799 aa4.85□□□□□ -1.63
Trim11-203ENSMUST00000108810 Gm38119A0A0A6YX29 146 aa4.83□□□□□ -1.64
Trim11-203ENSMUST00000108810 Fsip2A2ARZ3 6995 aa4.81□□□□□ -1.64
Trim11-203ENSMUST00000108810 Lce1cQ9D1C5 147 aa4.8□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms